Protein Alignment htk and arid3a

DIOPT Version :9

• Sequence 1: NP_573330.3
• Gene: htk / 32877
• FlyBaseID: FBgn0085451
• Length: 2486
• Species: Drosophila melanogaster
• Sequence 2: XP_009304080.1
• Gene: arid3a / 562799
• ZFINID: ZDB-GENE-140106-97
• Length: 524
• Species: Danio rerio
• Alignment Length: 505
• Identity: 106/505 - (20%)
• Similarity: 200/505 - (39%)
• Gaps: 140/505 - (27%)

  Fly   152 NEDSSEDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYL 216
            :.:..|||:|.|.:|..::.::.:|      :|.:::.|:|:                 .:|::
Zfish    73 SSEGDEDDEEEDEEEGEDQYKDMMG------SEEEEQIKQKF-----------------DEDDF- 113

  Fly   217 VRSFKDGRYYTVPKKEATEFTREVASKQDVPAVQAALE------FLDSSVLPAHWDRDSLF---- 271
                           |..::..|:.. :.:|:.:.|:.      .|....|..|    ||.
Zfish   114 ---------------EEEDYDEELGD-EGLPSGREAVTPGRGILLLPHRQLQPH----SLMLKAR 158

  Fly   272 --------GLTNISSDDEGEIDSDSSDDEPHEEKDR-------------FVAQLYKYMDDRGTPL 315
                    .||:.:...:|.:......|..:||:.|             |:..|:.:|..:|||:
Zfish   159 PGSESEARALTHSAHSSQGPLHGQDHADWTYEEQFRQLYELDSDPKRKEFLDDLFSFMQKKGTPV 223

  Fly   316 NKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTPCTVSVMNLVKQAYKKFLQP 380
            |::|.:..:.:|||.|::.|.::||...|.::..|:.|...|.......|....::..|.|:|..
Zfish   224 NRIPIMAKQVLDLYMLYQLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYT 288

  Fly   381 YGDFHRKL-GCSMLMTSRNSNRSKGRSLVRANSV--ASPKPMETM-----KTETISKLAQPN--- 434
            |....|.| ..:.|..:.:|||.:||.....||:  .||....||     :|.:...:|.|:
Zfish   289 YECEKRALSNPNELKAAIDSNRREGRRQGFGNSLFTYSPNGTPTMLSSPKRTMSSMGIALPSNGA 353

  Fly   435 ---------------QTNVVASTSSSAAAASVAASSTPARAVSTASQSAAEESGNTSESSVVVEP 484
                           ||.:.||.::.:.||:.||:   |:|.:.|..:|.|:..:..|:.   ||
Zfish   354 SISSIQNIKKEDDGFQTRLPASLATHSVAAAQAAA---AQAATIAQVAALEQLRDNLETG---EP 412

  Fly   485 PKKQ----------------RKGSAASSQQGKVKSLVEKYEEK-STAVQATSSGT---------- 522
            |:|:                :....|.:.|..:...:...|.: .:|:..|::|.
Zfish   413 PRKKIALPLEEHQRLLQRALQHNLMAMTAQIPMNIRINNQESRPDSAMNLTTNGLNSISMSLELN 477

  Fly   523 -VAGSGASASAAAMPTTSAAASTATNLSSATSGGSATIAT-TAMNKDAES 570
             |..:|. ..|.::..||..||   |.|:..||..:.:.| |:.:.:.:|
Zfish   478 GVVYTGV-LFAQSVAQTSLGAS---NKSTGNSGPQSVLHTPTSSSSNNQS 523

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
htk	NP_573330.3	RBB1NT	171..262	CDD:285392	10/96 (10%)
		ARID	299..381	CDD:279697	24/94 (26%)
		Tudor-knot	692..751	CDD:288553
arid3a	XP_009304080.1	BRIGHT	203..294	CDD:128777	24/90 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.000