Sequence 1: | NP_573330.3 | Gene: | htk / 32877 | FlyBaseID: | FBgn0085451 | Length: | 2486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001275554.1 | Gene: | Arid3a / 13496 | MGIID: | 1328360 | Length: | 601 | Species: | Mus musculus |
Alignment Length: | 582 | Identity: | 123/582 - (21%) |
---|---|---|---|
Similarity: | 210/582 - (36%) | Gaps: | 140/582 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 120 ESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNEDSSEDDD------ESDAKEVVNEKEENIGKV 178
Fly 179 VCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREVASK 243
Fly 244 QDV-----PAVQAALEFLDSSVLPAHWDRDSLFGLTNISSDDEG------------EIDSDSSDD 291
Fly 292 EPHEEKDRFVAQLYKYMDDRGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMR 356
Fly 357 LGFTPCTVSVMNLVKQAYKKFLQPYGDFHRKLGC-SMLMTSRNSNRSKGR--------------- 405
Fly 406 ---------------SLVRANSVASPKPMETMKTETIS--KLAQPNQTNVVASTSSSAAAASVAA 453
Fly 454 SSTPARAVSTASQSAAEESGNTSESSVVVEPPKKQRKGSAASSQQGKVKSLVEKYEEKSTAVQAT 518
Fly 519 SSGTVAGSGASASAAAMPTTSAAASTATNLSSATSGGSAT----------IATTAMNKDAESDLP 573
Fly 574 LAKIKAAAVAAASTRHSMEKETNISSGSSASASSKANSAEMQRSRDASPSVAAPPSAGASTS 635 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
htk | NP_573330.3 | RBB1NT | 171..262 | CDD:285392 | 16/95 (17%) |
ARID | 299..381 | CDD:279697 | 23/81 (28%) | ||
Tudor-knot | 692..751 | CDD:288553 | |||
Arid3a | NP_001275554.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..224 | 33/170 (19%) | |
Acidic | 128..165 | 11/43 (26%) | |||
ARID_ARID3A | 224..356 | CDD:350642 | 37/138 (27%) | ||
Important for nuclear localization | 450..493 | 13/46 (28%) | |||
Homodimerization. /evidence=ECO:0000250 | 495..518 | 3/22 (14%) | |||
Important for cytoplasmic localization | 542..562 | 4/40 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 545..601 | 15/79 (19%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2744 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1374 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |