Protein Alignment Pvf1 and Pdgfc

DIOPT Version :10

• Sequence 1: NP_523407.1
• Gene: Pvf1 / 32876
• FlyBaseID: FBgn0030964
• Length: 325
• Species: Drosophila melanogaster
• Sequence 2: NP_112607.1
• Gene: Pdgfc / 79429
• RGDID: 68410
• Length: 345
• Species: Rattus norvegicus
• Alignment Length: 219
• Identity: 51/219 - (23%)
• Similarity: 80/219 - (36%)
• Gaps: 51/219 - (23%)

  Fly    55 SSSSTQTKVRLLRQADDPSAAPGALEGSCCQGAAAEAGTPLTLPLS-VSAELTN--VTA------ 110
            :|.....::|.:.....||.....:..|.......|..:|..||.| :|.:|.|  |||
  Rat   134 TSKGNHIRIRFVSDEYFPSEPGFCIHYSIIMPQVTETTSPSVLPPSALSLDLLNNAVTAFSTVEE 198

  Fly   111 ------------DYD--VSGEMPSSKENF---KRS------IMKSTVRNATPASCSPQPTIVELK 152
                        |.|  .....|...:.|   |:|      ::|..|:   ..||:|:...|.::
  Rat   199 LIRFLEPDRWQIDLDSLYKPTWPLLGKAFLYGKKSKAVNLNLLKEEVK---LYSCTPRNFSVSIR 260

  Fly   153 PPAEDEANYYYMPACTRISRCNGCCGSTLISCQ-----PTEV-----EQVQLRVRKVDRAATSG- 206
            ...: ..:..:.|.|..:.||.|.|...|.:|.     |.:|     |.:|||    .:....|
  Rat   261 EELK-RTDTIFWPGCLLVKRCGGNCACCLHNCNECQCVPRKVTKKYHEVLQLR----PKIGVKGL 320

  Fly   207 RRPFTIITVEQHTQCRCDCRTKAE 230
            .:..|.:.:|.|.:|.|.||...|
  Rat   321 HKSLTDVALEHHEECDCVCRGNTE 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pvf1	NP_523407.1	PDGF	140..226	CDD:238079	24/96 (25%)
Pdgfc	NP_112607.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	24..45
		CUB	49..162	CDD:238001	4/27 (15%)
		PDGF	248..340	CDD:238079	24/96 (25%)