Protein Alignment Pvf1 and pdgfc

DIOPT Version :9

• Sequence 1: NP_523407.1
• Gene: Pvf1 / 32876
• FlyBaseID: FBgn0030964
• Length: 325
• Species: Drosophila melanogaster
• Sequence 2: XP_021330008.1
• Gene: pdgfc / 560564
• ZFINID: ZDB-GENE-071217-2
• Length: 343
• Species: Danio rerio
• Alignment Length: 221
• Identity: 47/221 - (21%)
• Similarity: 82/221 - (37%)
• Gaps: 56/221 - (25%)

  Fly    56 SSSTQTKVRLLRQADDPSAAPGALEGSCCQGAAAEAGTPLTLPLSVS--AELTNVTADYDVSGEM 118
            |...|..||.:.....||....::..|..|...:|...|..:|:.:.  .:||...:.::...|:
Zfish   133 SKGNQILVRFVSDEYFPSDPGFSIRYSLLQQRQSEPEAPAVMPVWMQPVEDLTEAVSAFNTMEEV 197

  Fly   119 PSSKE------------------------NFKRS-------IMKSTVRNATPASCSPQPTIVELK 152
            ....|                        :.|:|       :::..||   ..||:|:...|.|:
Zfish   198 MKYLEPERWQLDMDDLYKPTWQVLGKSFFHQKKSRGAVDLNLLREDVR---LYSCTPRNFSVSLR 259

  Fly   153 PPAEDEANYYYMPACTRISRCNG---CCGSTLISCQ--PTEV-----EQVQLRVRKVDRAATSGR 207
            ...: ..:..:.|:|..:.||.|   ||......||  ||:|     |.:.|:.|      |.||
Zfish   260 EELK-RTDAIFWPSCLLVKRCGGNCACCSYNCYDCQCSPTKVAKKYHEVLMLKHR------TGGR 317

  Fly   208 ---RPFTIITVEQHTQCRCDCRTKAE 230
               :....:.:|.|.:|.|.|:..::
Zfish   318 GLQKTLADVPLEHHEECNCVCKNDSD 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pvf1	NP_523407.1	PDGF	142..223	CDD:278756	25/93 (27%)
pdgfc	XP_021330008.1	CUB	54..158	CDD:214483	6/24 (25%)
		PDGF	247..339	CDD:238079	27/98 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR11633
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.100