Sequence 1: | NP_523407.1 | Gene: | Pvf1 / 32876 | FlyBaseID: | FBgn0030964 | Length: | 325 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113949.2 | Gene: | Vegfd / 360457 | RGDID: | 620695 | Length: | 326 | Species: | Rattus norvegicus |
Alignment Length: | 203 | Identity: | 48/203 - (23%) |
---|---|---|---|
Similarity: | 79/203 - (38%) | Gaps: | 43/203 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 142 CSPQPTIVELKPPAEDEANYYYMPACTRISRCNGCCGSTLISCQPTEVEQVQLRVRKVDRAATSG 206
Fly 207 RRPFTI-ITVEQHTQCRC--------------DCRTKAED-CNVYQSYRKDLCRCECHNTDARDK 255
Fly 256 CLEQAENKY-WVDDNCTCVCRYNQS---CTTGTVFDETQCKCTDPA-APIDVLDRKRFIVQAVQV 315
Fly 316 DPDNTTLY 323 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pvf1 | NP_523407.1 | PDGF | 142..223 | CDD:278756 | 22/81 (27%) |
Vegfd | NP_113949.2 | PDGF | 114..198 | CDD:197537 | 23/83 (28%) |
4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C | 227..317 | 20/86 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1364454at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |