DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvf1 and LOC3291994

DIOPT Version :10

Sequence 1:NP_523407.1 Gene:Pvf1 / 32876 FlyBaseID:FBgn0030964 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_061512717.1 Gene:LOC3291994 / 3291994 VectorBaseID:AGAMI1_015076 Length:752 Species:Anopheles gambiae


Alignment Length:342 Identity:71/342 - (20%)
Similarity:115/342 - (33%) Gaps:121/342 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AGSLVSPNNRQPSQRFFYAAATSSSSTQTKVRLLRQADDPSAAPGALEGSCC--------QGAAA 89
            :|..:|.:.|.|:.....:..|::::|...:.......|.::..|:.:||..        |.|.|
Mosquito   387 SGGTMSTSTRAPASTTTTSTTTTTTTTPRAILSASSDSDEASGGGSNDGSAADPSYSSYYQKAYA 451

  Fly    90 EAGTPL--------TLPLSVSAELTNVT--------------------------ADYDVSG---- 116
            ....|.        :|..:.:|..|.|.                          .||..:.    
Mosquito   452 IHSNPRRNGNNRYNSLTRTAAASPTAVNHHSKRPHFDRIDPAKQVAYPGRYQSFTDYKQANFGTK 516

  Fly   117 ---------------EMPSSKENFKRSIMKSTVRNATPASCSPQPTIVELKPPAEDEANYYYMPA 166
                           |...:|::.:|.|.:...:       .|:|.||    ||.::....:.|.
Mosquito   517 DAVERSYSAYSNSQHERHQAKQHMERMIREGMCK-------VPKPRIV----PASNDRTKLFTPQ 570

  Fly   167 CTRISRC---NGCCGSTLISCQPTEVEQVQL--------RVRKVDRAATSGRRPFTI-ITVEQHT 219
            ||.:.||   .||||.|. :|.|....:|||        .|:.|.:     |:..|| :|...||
Mosquito   571 CTILHRCEDDTGCCGPTQ-TCAPKTTSEVQLYFYVSSDSYVQNVGQ-----RQQNTIALTFSNHT 629

  Fly   220 QCRCDCRTKAEDCNVYQSYRKDLCRCECHNTDARDKCLE-QAENKYWV-------DDNCTCVCRY 276
            :|.|..|:.:.            .|.:.||      .|| .||....:       ..:|||...:
Mosquito   630 ECHCVQRSSSS------------VRMQSHN------LLEHSAEGSEGMGGSSSSSSSSCTCPGPF 676

  Fly   277 NQSCTTGTVFDETQCKC 293
             :|...||:    .|.|
Mosquito   677 -KSVNDGTL----PCYC 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pvf1NP_523407.1 PDGF 140..226 CDD:238079 31/97 (32%)
LOC3291994XP_061512717.1 None

Return to query results.
Submit another query.