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Protein Alignment Pvf1 and vegfaa
DIOPT Version :9
Sequence 1: | NP_523407.1 |
Gene: | Pvf1 / 32876 |
FlyBaseID: | FBgn0030964 |
Length: | 325 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_009290293.1 |
Gene: | vegfaa / 30682 |
ZFINID: | ZDB-GENE-990415-273 |
Length: | 207 |
Species: | Danio rerio |
Alignment Length: | 91 |
Identity: | 28/91 - (30%) |
Similarity: | 49/91 - (53%) |
Gaps: | 5/91 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 140 ASCSPQPTIVELKPPAEDEANYYYMPACTRISRCNGCCGSTLISCQPTEVEQVQLRVRKVDRAAT 204
::|..:..:|::.....||..:.|:|:|..:.||.|||....:.|.|||...|.:.|.:|.:..:
Zfish 47 SACKTRELLVDIIQEYPDEIEHTYIPSCVVLMRCAGCCNDEALECVPTETRNVTMEVLRVKQRVS 111
Fly 205 SGRRPFTIITVEQHTQCRCDCRTKAE 230
:..|. ::..:|| :|:||.|||
Zfish 112 --QHNFQ-LSFTEHT--KCECRPKAE 132
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pvf1 | NP_523407.1 |
PDGF |
142..223 |
CDD:278756 |
22/80 (28%) |
vegfaa | XP_009290293.1 |
PDGF |
49..127 |
CDD:278756 |
23/82 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I10814 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1364454at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto38794 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4285 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.950 |
|
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