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Protein Alignment Pvf1 and Pdgfa
DIOPT Version :9
Sequence 1: | NP_523407.1 |
Gene: | Pvf1 / 32876 |
FlyBaseID: | FBgn0030964 |
Length: | 325 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038945032.1 |
Gene: | Pdgfa / 25266 |
RGDID: | 3282 |
Length: | 211 |
Species: | Rattus norvegicus |
Alignment Length: | 95 |
Identity: | 28/95 - (29%) |
Similarity: | 46/95 - (48%) |
Gaps: | 2/95 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 131 KSTVRNATPASCSPQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTEVEQVQ 193
|.::..|.||.|..:..|.|:.....| .||:...|.|..:.||.|||.::.:.|||:.|....
Rat 85 KRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRS 149
Fly 194 LRVRKVDRAATSGRRPFTIITVEQHTQCRC 223
::|.||:......:.....:.:|:|.:|.|
Rat 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166342419 |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I10627 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto98527 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11633 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1138 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.940 |
|
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