Protein Alignment Pvf1 and Pdgfb

DIOPT Version :9

• Sequence 1: NP_523407.1
• Gene: Pvf1 / 32876
• FlyBaseID: FBgn0030964
• Length: 325
• Species: Drosophila melanogaster
• Sequence 2: NP_113712.1
• Gene: Pdgfb / 24628
• RGDID: 3283
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 216
• Identity: 50/216 - (23%)
• Similarity: 87/216 - (40%)
• Gaps: 49/216 - (22%)

  Fly    17 LILPVLLLVLIVSEAAAGSLVSPNNRQPSQRFFYAAATSSSSTQTKVRLLRQADDPSAAPGALEG 81
            |.||:...:.:||  |.|        .|.....|...:..|        :|..||       |:.
  Rat     7 LFLPLCCYLRLVS--AEG--------DPIPEELYEMLSDHS--------IRSFDD-------LQR 46

  Fly    82 SCCQGAAAEAGTPLTLPLSVSAELTNVTADYDVSGEMPSSKENFKRSIMKSTVRNATP---ASCS 143
            ...:.:..|.|..|.|         |:|..:  ||....|....:||:  .::..|.|   |.|.
  Rat    47 LLHRDSVDEDGAELDL---------NMTRAH--SGVESESSSRGRRSL--GSLAAAEPAVIAECK 98

  Fly   144 PQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTEVEQVQLRVRKVDRAATSG 206
            .:..:.::.....|  .||:...|.|..:.||:|||.:..:.|:.::|:...::|||::...
  Rat    99 TRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRASQVQMRPVQVRKIEIVR--- 160

  Fly   207 RRPF---TIITVEQHTQCRCD 224
            ::|.   ..:|:|.|..|:|:
  Rat   161 KKPVFKKATVTLEDHLACKCE 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pvf1	NP_523407.1	PDGF	142..223	CDD:278756	21/85 (25%)
Pdgfb	NP_113712.1	PDGF_N	21..>71	CDD:309710	15/83 (18%)
		PDGF	97..180	CDD:306779	21/85 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166342418
Domainoid	1	1.000	57	1.000	Domainoid score	I10627
eggNOG	1	0.900	-	-		E1_2C4GD
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11633
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1138
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	7	6.800