Protein Alignment Pvf1 and VEGFD

DIOPT Version :9

• Sequence 1: NP_523407.1
• Gene: Pvf1 / 32876
• FlyBaseID: FBgn0030964
• Length: 325
• Species: Drosophila melanogaster
• Sequence 2: NP_004460.1
• Gene: VEGFD / 2277
• HGNCID: 3708
• Length: 354
• Species: Homo sapiens
• Alignment Length: 188
• Identity: 44/188 - (23%)
• Similarity: 67/188 - (35%)
• Gaps: 44/188 - (23%)

  Fly   142 CSPQPTIVELKPPAEDEANYYYMPACTRISRCNGCCGSTLISCQPTEVEQVQLRVRKVDRAATSG 206
            |||:.|.||:........|.::.|.|..:.||.|||....:.|..|....:..::.::....||
Human   111 CSPRETCVEVASELGKSTNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTS- 174

  Fly   207 RRPFTI-ITVEQHTQCRC--------------DCRTKAED-CNVYQSYRKDLCRCECHNTDARDK 255
             .|..: :.|..||.|:|              ..:...|| |    |:.|.||..:......:.|
Human   175 -VPELVPVKVANHTGCKCLPTAPRHPYSIIRRSIQIPEEDRC----SHSKKLCPIDMLWDSNKCK 234

  Fly   256 CLEQAEN--------------------KYWVDDNCTCVCRYNQSCTTGTVFDETQCKC 293
            |:.|.||                    ..:.:|.|.|||:  ..|....:.....|.|
Human   235 CVLQEENPLAGTEDHSHLQEPALCGPHMMFDEDRCECVCK--TPCPKDLIQHPKNCSC 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pvf1	NP_523407.1	PDGF	142..223	CDD:278756	23/81 (28%)
VEGFD	NP_004460.1	PDGF	109..193	CDD:197537	24/83 (29%)
		4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C	222..318		14/71 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1364454at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	3	2.880