DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvf1 and Vegfb

DIOPT Version :10

Sequence 1:NP_523407.1 Gene:Pvf1 / 32876 FlyBaseID:FBgn0030964 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_035827.1 Gene:Vegfb / 22340 MGIID:106199 Length:207 Species:Mus musculus


Alignment Length:96 Identity:26/96 - (27%)
Similarity:48/96 - (50%) Gaps:8/96 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 ASCSPQPTIVELKPPAEDEANYYYMPACTRISRCNGCCGSTLISCQPTEVEQVQLRVRKVDRAAT 204
            |:|.|:..:|.|............:|:|..:.||.|||....:.|.||...||::::..:...::
Mouse    45 ATCQPREVVVPLSMELMGNVVKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIQYPSS 109

  Fly   205 S-GRRPFTIITVEQHTQCRCDCRTKAEDCNV 234
            . |.     :::|:|:|  |:||.|.::..|
Mouse   110 QLGE-----MSLEEHSQ--CECRPKKKESAV 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pvf1NP_523407.1 PDGF 140..226 CDD:238079 22/86 (26%)
VegfbNP_035827.1 PDGF 45..126 CDD:197537 23/87 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..178 1/5 (20%)

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