Protein Alignment Pvf1 and Vegfc

DIOPT Version :9

• Sequence 1: NP_523407.1
• Gene: Pvf1 / 32876
• FlyBaseID: FBgn0030964
• Length: 325
• Species: Drosophila melanogaster
• Sequence 2: NP_446105.1
• Gene: Vegfc / 114111
• RGDID: 619800
• Length: 415
• Species: Rattus norvegicus
• Alignment Length: 233
• Identity: 47/233 - (20%)
• Similarity: 76/233 - (32%)
• Gaps: 67/233 - (28%)

  Fly   124 NFKRSIMKSTVRNATPASCSPQPTIVELKPPAEDEANYYYMPACTRISRCNGCCGSTLISCQPTE 188
            ::...|:||.........|.|:...:::........|.::.|.|..:.||.|||.|..:.|..|.
  Rat   109 HYNTEILKSIDNEWRKTQCMPREVCIDVGKEFGAATNTFFKPPCVSVYRCGGCCNSEGLQCMNTS 173

  Fly   189 VEQVQLRVRKVDRAATSGRRPFTIITVEQHTQCRC-----------------------DCRTKAE 230
            ...:...:.::....:.|.:|.| |:...||.|||                       .|:...:
  Rat   174 TGYLSKTLFEITVPLSQGPKPVT-ISFANHTSCRCMSKLDVYRQVHSIIRRSLPATLPQCQAANK 237

  Fly   231 DC---NVYQSYR----------------------------------KDLCRCECHNTDARDKCLE 258
            .|   .|:.:|.                                  :|.|:|.|........|
  Rat   238 TCPANYVWNNYMCQCLAQQDFIFYSNVEDDSSNGFHDVCGPNKELDEDTCQCVCKGGLRPSSC-- 300

  Fly   259 QAENKYWVDDNCTCVCR---YNQSCTTGTVFDETQCKC 293
             ..:|....|:|.|||:   :..||.....|||..|:|
  Rat   301 -GPHKELDRDSCQCVCKNKLFLNSCGANREFDENTCQC 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pvf1	NP_523407.1	PDGF	142..223	CDD:278756	20/80 (25%)
Vegfc	NP_446105.1	PDGF	127..207	CDD:278756	20/80 (25%)
		4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C	276..358		18/65 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1364454at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.880