DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and rgs18

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:XP_005163294.2 Gene:rgs18 / 768164 ZFINID:ZDB-GENE-061013-722 Length:250 Species:Danio rerio


Alignment Length:141 Identity:53/141 - (37%)
Similarity:80/141 - (56%) Gaps:3/141 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 IPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRRSAHS-QVARKVNEI 552
            ||.:..:| |:.|.|:|:|...|::.||.||..|:|.|||.||:|....:.:..| ::..|..:|
Zfish    94 IPPDVAMK-WSDSFEDLLSHSDGVEVFTRFLRTEFSEENIEFWLACEDFKTTESSTKLQTKAKQI 157

  Fly   553 YEEFLKPGAPCEINIDGKTMESVLKGLKNPSRFTFDSASEHIYMLLLKKDCYPRFIRSEHYKRLL 617
            :..|:...||.|||||..|..::.|.:..|:...||:|...||. |:|:||||||:.|:.|..|.
Zfish   158 HAIFIDKEAPKEINIDHSTKAAIEKNILQPTNSCFDAAQHKIYG-LMKRDCYPRFLASDIYLTLT 221

  Fly   618 DTGIQPSYKKR 628
            .....|:..:|
Zfish   222 KRSGPPTMTRR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879
RGS_R7-like 494..614 CDD:188660 47/120 (39%)
rgs18XP_005163294.2 RGS 107..218 CDD:470619 44/111 (40%)
Blue background indicates that the domain is not in the aligned region.

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