DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42450 and rgs9a

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_001314729.1 Gene:rgs9a / 767636 ZFINID:ZDB-GENE-060929-92 Length:480 Species:Danio rerio


Alignment Length:417 Identity:175/417 - (41%)
Similarity:262/417 - (62%) Gaps:10/417 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 RPMAFDKMEMLVREMQDQEHGVPVRQQKMFLTSIPYAFMGYDLIEWLMDRLQIEESEALNIANQL 274
            |.....|:|.:|.:|||...||....||:.:|:||:.....|:|.|:...:.:|.:||......|
Zfish    16 RMTCLKKLEAMVVQMQDPSTGVKGSDQKLNVTTIPHVMTDQDIIAWIAKHMSMENNEAQAFGTML 80

  Fly   275 CLHGYFFPVNDSKTLTVKDDSSLYRFQTPYYWPWQHKAPDNVEYAIYLAKRSLRNKQRHALEDYE 339
            ..:||.:|:.|.|.|.:|.|.|||||||||:||.|..|.::::||||||||::|.|  .||:.:|
Zfish    81 VAYGYIYPLQDHKKLVLKSDGSLYRFQTPYFWPVQKWAAEDIDYAIYLAKRNIRKK--GALDAHE 143

  Fly   340 AEALASLHKNLKGKWDFISMQAEEQVRLAKERKKGDKIVGDSQERAYWRVHRPPPGQFTPLEPCP 404
            .|....|||.:..|||||.|||:||....|.|.|.|::|.|.||||||.||||||...:.::   
Zfish   144 QEEYDKLHKWMNHKWDFIVMQAKEQYHAGKARPKADRVVFDCQERAYWIVHRPPPQTHSAMD--- 205

  Fly   405 VPSRDRQGLKPN--KKKTVDDMQRDVDYLGKSLNRTRMKMSQACESLVCYSETFSEYDFFLQPAL 467
             ...||. :.||  :|||.|..:|...|..:::.|:|:|.|.:..:::.|...|:.:|.||.|.|
Zfish   206 -YGLDRH-IDPNTEEKKTFDYYRRINIYTQQAIMRSRVKSSVSLGAMLKYITNFNNHDPFLVPCL 268

  Fly   468 PSNPWVTEDIAFWQLNNTFVDIPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWI 532
            |||||:|::.|:|:||...:::||:.||:||:.|..||::||.|..:|..||:||:|.||:.||.
Zfish   269 PSNPWLTDNDAYWELNTDDIEVPTKMRVERWSFSFYELLNDPRGRADFKVFLKKEFSGENLAFWE 333

  Fly   533 AVNRLRRSAHSQVARKVNEIYEEFLKPGAPCEINIDGKTMESVLKGLKNPSRFTFDSASEHIYML 597
            |...|:..:.:.::.|..::::.||.||||..|||||:||...:|||::|.|:..::|..||:| 
Zfish   334 AAEELKFGSAATMSEKAEQVFKTFLAPGAPRWINIDGRTMGLTVKGLEHPHRYVLEAAQTHIFM- 397

  Fly   598 LLKKDCYPRFIRSEHYKRLLDTGIQPS 624
            |:|||.:.|:::|..||.:....|.|:
Zfish   398 LMKKDTFYRYLKSPVYKDIQKKAISPA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897 35/86 (41%)
RGS_DHEX 303..401 CDD:375589 51/97 (53%)
G-gamma 418..482 CDD:459879 25/63 (40%)
RGS_R7-like 494..614 CDD:188660 51/119 (43%)
rgs9aNP_001314729.1 DEP_RGS7-like 25..112 CDD:239897 35/86 (41%)
RGS_DHEX 109..208 CDD:375589 51/104 (49%)
GGL 223..283 CDD:128520 22/59 (37%)
RGS 295..415 CDD:470619 52/120 (43%)

Return to query results.
Submit another query.