DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and Rgs6

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:XP_063118437.1 Gene:Rgs6 / 54295 RGDID:3569 Length:591 Species:Rattus norvegicus


Alignment Length:555 Identity:211/555 - (38%)
Similarity:314/555 - (56%) Gaps:77/555 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 GSGNQQQ---AIEKLSRP--MAFDKMEMLVREMQDQE-HGVPVRQQKMFLTSIPYAFMGYDLIEW 255
            |||:|:.   |..:.|.|  :.:.|:|.::.:|||.: .|||:|..|.||:.||....|.|:::|
  Rat    43 GSGDQRAVGVADPEESSPNMIVYCKIEDIITKMQDDKTGGVPIRTVKSFLSKIPSVVTGTDIVQW 107

  Fly   256 LMDRLQIEES-EALNIANQLCLHGYFFPVNDSKTLTVKDDSSLYRFQTPYYWP---WQHKAPDNV 316
            ||..|.||:. ||:::.:.:...||.||::| ..||:|||.:.||||.||:||   |:   |:|.
  Rat   108 LMKNLSIEDPVEAIHLGSLIAAQGYVFPISD-HVLTMKDDGTFYRFQAPYFWPSNCWE---PENT 168

  Fly   317 EYAIYLAKRSLRNKQRHALEDYEAEALASLHKNLKGKWDFISMQAEEQVRLAKERKKGDKIVGDS 381
            :|||||.||:::||.|..|.|||||.||.|.:....||:||.||||.||::.:::.|.::.:.||
  Rat   169 DYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDS 233

  Fly   382 QERAYWRVHRPPPGQFTPLE------------------------------PCPVPSRDRQGLKPN 416
            ||||:|.||||.||.....|                              |..:||      :|.
  Rat   234 QERAFWDVHRPVPGCVNTTEMDIRKCRRLKNPQKVKKSVYGVTDESQSQSPVHIPS------QPI 292

  Fly   417 KKKTVDDMQRDVDYLGKSLNRTRMKMSQACESLVCYSETFSEYDFFLQPALPSNPWVTEDIAFWQ 481
            :|.|.||:::.:.:|...::|..:|||:..|||:.|:|.:.|||.|:.||.|||||:::||..|.
  Rat   293 RKTTKDDIRKQITFLNAQIDRHCLKMSKVAESLIAYTEQYVEYDPFITPAEPSNPWISDDITLWD 357

  Fly   482 LNNTFVDIPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRRSAHSQVA 546
            :..:  ..|:::|||||..|.:|::.|..|..:|..|||.|:|.||:|||:||..|::.....||
  Rat   358 IEMS--KEPSQQRVKRWGFSFDEILKDQVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVA 420

  Fly   547 RKVNEIYEEFLKPGAPCEINIDGKTMESVLKGLKNPSRFTFDSASEHIYMLLLKKDCYPRFIRSE 611
            ::|.||::|||.||||..||:|..:.|...:.:|:..|:||:.|.||||. |:|.|.|.||:||.
  Rat   421 KRVEEIWQEFLAPGAPSAINLDSHSYEITSQNVKDGGRYTFEDAQEHIYK-LMKSDSYARFLRSN 484

  Fly   612 HYKRLL--------DTGIQPSYKKRFFNFGGVSGAKKKMTAALSSQ----PNLGDAAKGPSGTSA 664
            .|:.||        :.|.:.|.:|  |........:.:|.||...:    |.:|..|.|.:....
  Rat   485 AYQDLLLAKKKPESEQGRRTSLEK--FTRSVCCWRRLRMAAAFHPRGGFLPAVGKVAGGQAPYGP 547

  Fly   665 GSSMMQAPPPG-------NLARRR--GSDR-SLTG 689
            .:.::.||.||       :..|||  .:|| ||.|
  Rat   548 DAVLLTAPIPGSGPGPTEHPGRRRSTSNDRASLRG 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897 38/88 (43%)
RGS_DHEX 303..401 CDD:375589 50/100 (50%)
G-gamma 418..482 CDD:459879 28/63 (44%)
RGS_R7-like 494..614 CDD:188660 56/119 (47%)
Rgs6XP_063118437.1 None

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