DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and rgs18

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_001008092.1 Gene:rgs18 / 493454 XenbaseID:XB-GENE-5747705 Length:235 Species:Xenopus tropicalis


Alignment Length:156 Identity:48/156 - (30%)
Similarity:85/156 - (54%) Gaps:8/156 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 NNTFVDIPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRR-SAHSQVA 546
            |.|.:...:.:...:|..|.::|:|...|::.|..||:.|:|.||:.||:.....:: ..:.|:.
 Frog    66 NFTCITSVSPEEAMKWGESFDKLLSHKDGIEAFKKFLKMEFSDENLEFWLECEEYKKCQTNKQMD 130

  Fly   547 RKVNEIYEEFLKPGAPCEINIDGKTMESVLKGLKNPSRFTFDSASEHIYMLLLKKDCYPRFIRSE 611
            .|...:||::::..:|.|:|:|..|.|...|.::.|...:||.|...||. |::||.||||::|.
 Frog   131 DKAKSLYEKYIQMDSPREVNLDFATKEMTKKSIEQPELTSFDLAQTKIYS-LMEKDSYPRFLKSS 194

  Fly   612 HYKRLLDTGIQ-----PSYKKRFFNF 632
            .|...| :|.|     |:.::|..:|
 Frog   195 VYSNSL-SGNQRIASFPTGRRRSRSF 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879
RGS_R7-like 494..614 CDD:188660 39/120 (33%)
rgs18NP_001008092.1 RGS 85..198 CDD:470619 38/113 (34%)
Blue background indicates that the domain is not in the aligned region.

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