DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and rgs12b

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_999889.1 Gene:rgs12b / 378970 ZFINID:ZDB-GENE-031006-13 Length:1540 Species:Danio rerio


Alignment Length:1439 Identity:285/1439 - (19%)
Similarity:454/1439 - (31%) Gaps:482/1439 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TPNPQSSAQAQLSLVPSKPTSLSLQPHAVLQAMQQLSPSAG-------------GNNNASSTAAT 91
            ||:|.:....:.     .|||   ||  :||.:..|....|             |:.:|....:|
Zfish   377 TPDPDTGGCLEF-----PPTS---QP--LLQFVSVLYRDMGESIEGMRARAFLDGDLDAQQNNST 431

  Fly    92 ATSSSSGNAN--------------SGSSPALASTATAISATTQAATAFSGSSVG----------- 131
            :::|.||..|              .|::|   |.............:|...::|           
Zfish   432 SSNSDSGIGNFLPEEKNNRVLLVDLGANP---SRHVPTGPWENPMGSFCQGAIGGLPPPPPPPPI 493

  Fly   132 -HHHLQHHHQ---HTHPHAPQQSQSQQPQPQHQLQQPHPAGAPSSATQSHHHGS--ISVSG---- 186
             |.:...|.|   |..||                  ||..|.|...:..|.:.|  :.|||    
Zfish   494 SHRNGFRHEQFVDHPQPH------------------PHSHGDPPLLSGRHLNSSSRLDVSGLPSR 540

  Fly   187 ---SGGGLLGSSGGSGNQQQAIEKLSRPMAFDKMEMLVREMQDQEHGVPVRQQKMFLTSIPYAFM 248
               |..| ..::|.||.:.                :.|..::|...|....|:.       ||  
Zfish   541 SHYSAHG-KKAAGASGQRW----------------LPVHVLRDWRQGHSSDQES-------YA-- 579

  Fly   249 GYDLIEWLMDRLQIEESEALNIANQLCLHGYFFPVNDSKTLTVKDDSSLYRFQTPYYWPWQHKAP 313
                          |.::..:.||  |           .||.                |...|.|
Zfish   580 --------------ESTDGWSSAN--C-----------STLP----------------PPMSKIP 601

  Fly   314 -DNVEYAIYLAKRSLRNKQRHALEDYEAEALASLHKNLKGKWDFISMQAEEQVRLAKE-RKKGDK 376
             |....|..:|.:..|   .||.:|..|:.|.. .|||:.     ..|....||.||: .|||.:
Zfish   602 ADRYRAAGEIASQPHR---LHAQKDEWAKKLFG-EKNLRE-----HSQQSNNVRRAKDSEKKGGR 657

  Fly   377 IVGDSQERAYWRVHRPPPGQFTPLEPCPVPSRDRQGLKPNKK----KTVDDMQRDVDYLGKSLNR 437
            ..|.:.                   ..|..|..|:....:|:    :::||::......|: ||.
Zfish   658 FKGITM-------------------GFPQRSSGRRSFGRSKRLSMARSLDDLESAAVSDGE-LNS 702

  Fly   438 TRMKMSQACESLVCYSETFSEYDFFLQPALPSNPWVTEDIAFWQLNNTFVDIP--------TEKR 494
            ..:|...:..||                                  |:...:|        ||:|
Zfish   703 VDLKGCGSDNSL----------------------------------NSNASLPSVQCHRRHTERR 733

  Fly   495 VKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIA---VNRLRRSAHSQVARKVNEIYEEF 556
            |..||:..|.|:.||.|::.|:.||:||:|.|||.||.|   .:.:..:...|::::..|||..|
Zfish   734 VASWAVCFERLLQDPVGVRYFSEFLKKEFSEENILFWQACEYFSHVPETDKKQLSQRAREIYNSF 798

  Fly   557 LKPGAPCEINIDGKTM--ESVLKGLKNPSRFTFDSASEHIYMLLLKKDCYPRFIRSEHYKRLLDT 619
            |...|...:|||.:..  :.:|..   |....|......|:. |:|.|.|.||::|..|:..:..
Zfish   799 LSSKATTPVNIDSQAQLADDILNA---PRPDMFKEQQLQIFN-LMKFDSYTRFLKSYLYQECMLA 859

  Fly   620 GIQ----------PSYKKRFFNFGGVSGAKKKMTAA----LSSQPNLGDAAKGPSGTSAGS---- 666
            .::          ||           |...|..|.:    ||:...:.|..|..||.|...    
Zfish   860 EVEGRPLPDPYQVPS-----------SPTSKHSTGSDRSNLSTPKKVQDDKKSKSGRSLNEDSRD 913

  Fly   667 -------------SMMQAPPPGNLAR------------RRGSDRSL-TGSAHELAVIGVNKDAGS 705
                         |..::...|:..|            ||.|..|| :|::.|||..|..|:.|.
Zfish   914 EHGDKKKSIFFSWSRNRSFGKGSKKRDLADYSFTGSNGRRESQGSLSSGASLELATSGSGKNEGE 978

  Fly   706 KVPHS---------HSQSNLSE-----IPF----SSDSIYRGDMPQRHMAIMDIGIYAAYGNR-- 750
            ...:|         |...||.:     :|.    |...:..|...:..:.:..:.::...|.:  
Zfish   979 VSRNSMSLSERAVRHCNINLPDGSCCSVPIRPGVSIREVLLGLCEKLGINLAAVDLFLVGGEKPL 1043

  Fly   751 -----------------ESSLQALPETPKTKTTVLDATESTSSSTALAAAASSAVCPWDDPAESV 798
                             :.:|..|...|..::..|.|..:...:..|....:.......|...::
Zfish  1044 VLDQDCMTLCSRDLRLEKRTLFRLDLVPINRSVGLKAKPTKPVTEVLRPVVAKYGLNLGDLVATI 1108

  Fly   799 PPPPPPAQVKLSVCPWELDSATETPTAAPAVGSGGGGAGASKILSST--GQPMRLNSTSSDNSD- 860
            .....|..:.|.:.  .||.......|    |....|....|::||.  |.|:...|.|:...| 
Zfish  1109 SGEKEPLDLGLPIS--NLDGLRVVLEA----GDHVSGKDKQKLVSSKSHGPPLSTRSQSATGEDK 1167

  Fly   861 -------------VNDRMQRNLGIRHQNTVDSGEAG---IKRLIPNIPEQRRASVSFTPSPTPDF 909
                         |..|.|:.|.|      |..|..   |.:...|..:.:|..::.:....|||
Zfish  1168 TAGKASAVKTRAQVEKRKQKKLNI------DEAEEFFELISKAQSNRADDQRGLLNKSDLVLPDF 1226

  Fly   910 QLGRTPTTTSSPTVAPSSSTPLQARSAVYGSGQGIAKDPPSGSDVDAELE-EELNKISLGES--- 970
            .  |..|......:   ||||:..::.        .:...:||.:.|..: :.|:....|::   
Zfish  1227 L--RLDTEADGNNL---SSTPISHKTR--------PRSKENGSALSASHQTQSLDSAGEGKAPRR 1278

  Fly   971 SISEPPLLVVPTPEQTPPPITKITPPPGESENQADQVIDSTEIPGSSCST--------QANQFGE 1027
            ::..|...:..|..:.|||.:....|           |..:::.|||..|        ||.:..|
Zfish  1279 ALMPPNSALRNTSSRIPPPFSSSLSP-----------IPHSQMGGSSGITDWRSDGGVQALEEEE 1332

  Fly  1028 ATATVTTVKEVQIELIEQVSGVQTEPDSPPTIKVLVLEATTPV--SAETATADPGENLAKMATAS 1090
            :...:|.|.|..|          |.|:|.     |:.::..|:  |.|.:      :|.|..|..
Zfish  1333 SGMDLTFVAEGDI----------TSPNSS-----LLHQSPIPLPPSPERS------HLLKEDTCQ 1376

  Fly  1091 NTTTITTDDQAMRADDDAERAAEIEQTVLDELSPTTDEYQEFGDAKDAVDDFDSIDIG-----YI 1150
                          |..|.....:.:||:...:       .|...|:.....|...:.     ..
Zfish  1377 --------------DSWARSGGLMTKTVVSNRN-------RFSSVKNERRQRDRTSVSKYSHRRA 1420

  Fly  1151 PPAPTPAPSMAPLAELDVDTVDDEPCEPAAPPPSHSAPASSSSRELVMASGSVTATPTSSNEEAR 1215
            |.||.|.|...|            |..|:|||....|    ..|..:...|::........:...
Zfish  1421 PSAPPPPPPHPP------------PAPPSAPPRVRGA----GKRSPLHVRGALDVDGIHCGDLGG 1469

  Fly  1216 KRRKKRNSEGKKLSSQDDKDKDAHERAG-------------GSSMDAADHNAVCP-----WEDEN 1262
            ..|:   |||.:....|.|......|.|             ...:|.....::.|     .:..|
Zfish  1470 DNRE---SEGLERVVGDLKTSKGRMRTGVYQTSDQAELLPTKKRIDPVAKKSIKPSVKTSSKKSN 1531

  Fly  1263 VSTNDGTFV 1271
            .|.|:.|||
Zfish  1532 HSKNNATFV 1540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897 12/86 (14%)
RGS_DHEX 303..401 CDD:375589 24/99 (24%)
G-gamma 418..482 CDD:459879 8/67 (12%)
RGS_R7-like 494..614 CDD:188660 42/124 (34%)
rgs12bNP_999889.1 PDZ_RGS12-like 21..96 CDD:467194
PTB_RGS12 239..372 CDD:269984
RGS_RGS12 741..855 CDD:188696 39/117 (33%)
RGS12_us1 861..973 CDD:465199 25/122 (20%)
RBD1_RGS12 992..1061 CDD:340656 7/68 (10%)
RBD2_RGS12 1062..1134 CDD:340658 12/77 (16%)
RGS12_us2 1136..1193 CDD:435461 14/62 (23%)
GoLoco 1195..1216 CDD:214645 4/20 (20%)
RGS12_usC <1323..1374 CDD:465198 16/71 (23%)
Blue background indicates that the domain is not in the aligned region.

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