DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and Rgs4

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_058910.1 Gene:Rgs4 / 29480 RGDID:3567 Length:205 Species:Rattus norvegicus


Alignment Length:238 Identity:66/238 - (27%)
Similarity:110/238 - (46%) Gaps:50/238 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 GLKPNKKKTVDDMQRDVDYLGKSLNRTRMKMSQACESLVCYSETFSEYDFFLQPALPSNPWVTED 476
            ||..:..::..||:..:.:|        ::.|.:||    :|.:.|:.|..:.....|       
  Rat     7 GLPASCLRSAKDMKHRLGFL--------LQKSDSCE----HSSSHSKKDKVVTCQRVS------- 52

  Fly   477 IAFWQLNNTFVDIPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRR-S 540
                           ::.||:||.|:|.|::...||..|..||:.|||.|||.|||:....:: .
  Rat    53 ---------------QEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIK 102

  Fly   541 AHSQVARKVNEIYEEFLKPGAPCEINIDGKTMESVLKGLKNPSRFTFDSASEHIYMLLLKKDCYP 605
            :.|:::.|..:||.||:...|..|:|:|..|.|...:.:..|:...||.|.:.|:. |::||.|.
  Rat   103 SPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFN-LMEKDSYR 166

  Fly   606 RFIRSEHYKRLLDTGIQPSYKKRFFNFGGVSGAKKKMTAALSS 648
            ||::|..|..|.:    ||          ..||:|:..|..|:
  Rat   167 RFLKSRFYLDLTN----PS----------SCGAEKQKGAKSSA 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879 10/63 (16%)
RGS_R7-like 494..614 CDD:188660 45/120 (38%)
Rgs4NP_058910.1 RGS_RGS4 63..176 CDD:188669 41/113 (36%)
Blue background indicates that the domain is not in the aligned region.

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