DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and rgs-4

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_001364555.1 Gene:rgs-4 / 189666 WormBaseID:WBGene00004347 Length:308 Species:Caenorhabditis elegans


Alignment Length:192 Identity:58/192 - (30%)
Similarity:90/192 - (46%) Gaps:37/192 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 IPTEKRV--KRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRRSAHSQVARK--- 548
            :|...|:  ..|..:.:.::.|..|..:||.||:.|||.|||.||.||..|:....|:...|   
 Worm   141 VPPSPRLSPNEWQFAFDHVIYDVDGRAQFTKFLQSEYSEENILFWWAVEELKAVGVSEGRTKFES 205

  Fly   549 -VNEIYEEFLKPGAPCEINIDGKTMESVL---KGLKNPSRF---TFDSASEHIYMLLLKKDCYPR 606
             |.|:|:.|:...:|..||||..|...::   :| |.||.|   .::.|..|:|. |::|||:.|
 Worm   206 TVQEMYDTFIAAESPLAINIDHDTRTDIIALVEG-KEPSTFPENIYERAQAHVYR-LMEKDCFSR 268

  Fly   607 FIRSEHYKRLLDTGIQPSYKKRF-FNFGGVSGAKKKMTAALSSQPNLGDAAKGPSGTSAGSS 667
            |:.:..||   |...:.|..:.| ||             .:..||.      ||:..:|.::
 Worm   269 FVHTNAYK---DVAKKLSLPQTFRFN-------------CIRLQPG------GPTAQAAATN 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879
RGS_R7-like 494..614 CDD:188660 45/131 (34%)
rgs-4NP_001364555.1 RGS 156..277 CDD:214613 45/125 (36%)
Blue background indicates that the domain is not in the aligned region.

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