DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42450 and rgs-10

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_510482.1 Gene:rgs-10 / 185764 WormBaseID:WBGene00004353 Length:270 Species:Caenorhabditis elegans


Alignment Length:146 Identity:39/146 - (26%)
Similarity:75/146 - (51%) Gaps:10/146 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 DIPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRRSAHSQVARKVNEI 552
            ::|:.:.|:||..|.|.|.:...|...|..||:::.|...:.||:...:.|.|..|....:...|
 Worm   122 ELPSSEDVERWKKSPETLAASEYGCNLFIQFLKEQTSENEVDFWLDCQKFRSSKMSSRQNEARRI 186

  Fly   553 YEEFLKPGAPCEINIDGKTMESVLKG--LKNPS-RFTFDSASEHIYMLLLKKDCYPRFIRSEHYK 614
            ::|:...|:|.:|.|: :.:..|::.  :.:|. |.|||.|..::.:.|.||. :.:|:....|.
 Worm   187 FDEYFAMGSPKKIYIE-RYLWCVVQAYLVNDPGWRHTFDVAQAYVGLKLAKKS-HKKFLEDPLYL 249

  Fly   615 RLLD---TGIQPSYKK 627
            .|::   :|:  :|.|
 Worm   250 DLVELVTSGV--NYNK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879
RGS_R7-like 494..614 CDD:188660 33/122 (27%)
rgs-10NP_510482.1 RGS 135..251 CDD:459870 31/117 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.