DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42450 and rgs-6

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_001294820.1 Gene:rgs-6 / 180840 WormBaseID:WBGene00004349 Length:734 Species:Caenorhabditis elegans


Alignment Length:799 Identity:152/799 - (19%)
Similarity:246/799 - (30%) Gaps:264/799 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 QPALPSNPWVTEDIAFWQLNNTFVDIPTEKRVKRWAISIEELVSDPTGLQEFTGFLEKEYSHENI 528
            :||.|:|.....:.:...|:........|....|.....::::.||.....|..|||:::..||:
 Worm     9 EPATPTNTSPNNETSNSCLSMGVGVASNETNSSRELKIFKKVIRDPVLRAPFQEFLEQQFCAENL 73

  Fly   529 RFWIAVNRLRR----SAHSQVARKVNEIYEEFLKPGAPCEINIDGKTMESVLKGLKNPSRF---T 586
            .|::||.:.:.    ...|...|:   |::.:....:...:|||..|.:.:.:.::: ..|   |
 Worm    74 NFYLAVEQFKEIQDFQERSSFGRR---IFDRYFAMNSTEPVNIDNSTSKRIRETVES-GGFPLDT 134

  Fly   587 FDSASEHIYMLLLKKDCYPRFIRSEHYKRLLDTGIQPSY-----------KKRFFNFGGVSGAKK 640
            :|.|...| :.|||.||:|||:||.:       ..|||:           |........::...:
 Worm   135 YDVAQYQI-LHLLKYDCWPRFLRSTN-------NSQPSFTDEELAADDEDKNGHSQPTSLNNTNE 191

  Fly   641 KMTAALSSQPNLGDAAKGPSGTSAGSSMMQAPP-------------PGNLARRRGSDRSLTGSAH 692
            ...||..|||    |...|:.|....|...:.|             |.:|.|.|           
 Worm   192 FEAAAQQSQP----APNAPAATKEKPSKQYSMPAEMTSPVKKNSLSPTHLRRCR----------- 241

  Fly   693 ELAVIGVNKDAGSKVPHSHSQSNLSEIPFSSDSIYRGD-----------------MPQRHMAIMD 740
                         .|...|.|..:.: .|:::::...|                 |.:.|:.::|
 Worm   242 -------------PVEPKHCQLMIGD-QFNTETVTLSDPTMSVRRWTQEMADAQGMDRMHVEVVD 292

  Fly   741 IGIYAAYGNRESSLQAL--------------------------PETPKTKTTVLDATESTSSSTA 779
            ....:.......::.||                          |.:..||...:.|..|.|:...
 Worm   293 AETGSTIDPARQAIDALQSRALRLVPVVSFIIEFLPANFSFKNPASTPTKLVCIRARHSLSTGAV 357

  Fly   780 L-----------------------------AAAASSAVC-------PWDDPAESVPPPPPPAQVK 808
            |                             |....|..|       .:.|...:.....||....
 Worm   358 LRPLLHKYTLDPQVTRIVLNGSLEQVKRSCAVGQVSQKCLTVMSEAQYSDRVNAGKVSLPPRDPI 422

  Fly   809 LSVCPWELDSATETPTAAPAVGSGGGGAGASKILSSTGQPMRLNSTSSDNSDVNDRMQRNLGIRH 873
            ||..|                         |.|......|...|...| ..::.:..:||   :|
 Worm   423 LSQLP-------------------------STIYEQNNFPFHQNGDIS-YCEIPNESERN---KH 458

  Fly   874 QNTVDSGEAGIKRLIPNIPEQ-------------RRASVSFTPS-PTPDFQLGRTPTTTSSPTVA 924
            .:....|        ||...|             |:||.:.:.| |.|  ..|.:....:|...:
 Worm   459 AHLQHDG--------PNAAHQQKEYTLSIFNKFVRKASHAVSKSDPNP--SAGTSQDRMASGVYS 513

  Fly   925 PSSSTPLQARSAVYGSG-QGIAKDPPSGSDVDAE---LEEELNKISL----GESSISEP------ 975
            |::..|..|..|..|:. .|.|....:||...:.   .|...|::|:    .|..:.:|      
 Worm   514 PATGGPSFASRAAAGTNFGGSANQVNAGSASTSSNNVSEPSKNRLSIFKSKTEKKVVKPESEKEK 578

  Fly   976 --------PLLVVPTP--EQTPPPITKITPPP-------GESENQADQ-----VIDSTEI----- 1013
                    |.....||  .:|.|..::.|..|       |:..:|..|     .|.||:|     
 Worm   579 LKPRSDDIPTTSTSTPMAVETKPNGSRTTEEPLKRMGKSGDDGSQEPQGIRHPAIFSTKIGDEAA 643

  Fly  1014 ---PGSSCSTQANQFGEATATVTTVKEVQIELIEQVSGVQTEPDSPPTIKVLVLEATTPVSAETA 1075
               .|:|.||.|.....:..|.||                |.|...||...:....||..:..:.
 Worm   644 AAAAGASPSTSAPSTSTSVQTKTT----------------TSPTKSPTSTTITTSGTTTSATSSV 692

  Fly  1076 TADPGENLAKMATASNTTT 1094
            ...|...|..|.:||...|
 Worm   693 ATAPPPVLHAMRSASTPAT 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879 4/17 (24%)
RGS_R7-like 494..614 CDD:188660 34/126 (27%)
rgs-6NP_001294820.1 RGS 47..157 CDD:214613 31/114 (27%)
Blue background indicates that the domain is not in the aligned region.

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