DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42450 and rgs-9

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:NP_508350.1 Gene:rgs-9 / 180506 WormBaseID:WBGene00004352 Length:235 Species:Caenorhabditis elegans


Alignment Length:146 Identity:32/146 - (21%)
Similarity:55/146 - (37%) Gaps:27/146 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 DIPTEKRVKRWAISIEEL-VSDPTGLQEFTGFLEKEYSHENIRFWIAVNRLRRSAHSQVARK--- 548
            :|...:.:..|..|...| .|:..|......||:::.|.:.:.||:.....|.: .::..||   
 Worm    93 EISLREDILSWKKSPHSLAASEYGGSDLLVQFLKQQTSDDYVDFWLESGEYRWT-RTKPGRKRDI 156

  Fly   549 -VNEIYEEFLKPGAP---------CEINIDGKTMESVLKGLKNPSRFTFDSASEHIYMLLLKKDC 603
             ...||::|:....|         |.::..|.|           .|..|..|..:: .....||.
 Worm   157 EAQRIYDKFVYGECPRKIAHLEKMCFVSRQGPT-----------GRDVFICAQAYV-GTNFPKDS 209

  Fly   604 YPRFIRSEHYKRLLDT 619
            |.:|::...|..||.|
 Worm   210 YKKFLQDPIYLNLLKT 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897
RGS_DHEX 303..401 CDD:375589
G-gamma 418..482 CDD:459879
RGS_R7-like 494..614 CDD:188660 27/133 (20%)
rgs-9NP_508350.1 RGS 106..222 CDD:214613 27/128 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.