DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42450 and fhip1a

DIOPT Version :10

Sequence 1:NP_001259691.1 Gene:CG42450 / 32874 FlyBaseID:FBgn0259927 Length:1280 Species:Drosophila melanogaster
Sequence 2:XP_002933543.3 Gene:fhip1a / 100486834 XenbaseID:XB-GENE-951017 Length:981 Species:Xenopus tropicalis


Alignment Length:956 Identity:173/956 - (18%)
Similarity:282/956 - (29%) Gaps:380/956 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 EMLVREM-QDQEHGVPVRQQKMFLTSIPYAFMGYDLIEWLMDRLQIEESEALNIANQLCLHGYFF 281
            |:||.:. |...|..|:.:..|.|.|   |..|        ....:.|::...:.||||      
 Frog   122 ELLVTQSHQPLLHHKPILKPLMMLLS---ACSG--------TSTAVVETKLAVLLNQLC------ 169

  Fly   282 PVNDSKTLTVKDDSSLYRFQTPYYWPWQHKAPDNVEYAIYLAKRSLRNKQRHALEDYEA-EALAS 345
                  ::..||.|.|..|        .|.:.|.......:....:....|......:| :||..
 Frog   170 ------SILAKDPSILELF--------FHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLF 220

  Fly   346 LHKNLKGKWDFISMQAEEQVRLAKERKKGDKIVGDSQERAYWRVHRPPPGQFTPLEPCPVPSRDR 410
            :          :|:.||..| :||...:|...                         |||.:...
 Frog   221 I----------MSLSAENNV-VAKHIVEGTFF-------------------------CPVLATGL 249

  Fly   411 QGLKPNKKKTVDDMQRDVDYLGKSLNRTRMKMSQAC---ESLVCYSETFSEYDFFLQPALPSNPW 472
            .||..:....:||...|...|          :.:.|   ..|:.:..:....:..:|.|   :|.
 Frog   250 SGLYSSLPTKLDDKGEDWHCL----------LKEDCLQIPELIQFQNSLEFCNAVIQVA---HPL 301

  Fly   473 VTEDIAFWQLNNTFVDIPTEKRVKRWAISIEEL-------------VSDPTGLQEFTGFLEKEYS 524
            :...:..:..|...:.:......|   :::||:             ||:||.|:.|..|: ..:.
 Frog   302 IRAQLVDYIFNGFLLPVVAPALHK---VTVEEVMTTTAYLDLFLRSVSEPTLLKIFLRFI-LIHQ 362

  Fly   525 HENI-----------------------------------------RFWIAVNRLRRSAHSQVARK 548
            ||.:                                         |:.|..|.:..:..|.|  :
 Frog   363 HEKVHILDTLVSRINTPFRLCVVSLALFRTLIGLHCEDVMLQLILRYLIPCNHVMVTQRSAV--R 425

  Fly   549 VNEIY----EEFLKPGAPC---EINIDG-----KTMESVLKGLKNPSRFTFDSASEHIYMLLLKK 601
            ..:.|    |:||.....|   .::..|     :||.|..:      :.|....|:|:|    :|
 Frog   426 EQDCYSACAEKFLSLTPECCALTVSSTGYLERRQTMYSKFR------QRTDSDDSKHLY----EK 480

  Fly   602 DCYPRFIRSEHYKRLLDTGIQPSYKKRFFNFGGVSGAKKKMTAALSSQPNLGDAAKGPSGTSAGS 666
            |            .|:|                                  ||.|:         
 Frog   481 D------------TLMD----------------------------------GDCAE--------- 490

  Fly   667 SMMQAPPPGNLARRRGSDRSLTGSAHELAVIGVNKDAGSKV---PHSHSQSNLSEIPFSS---DS 725
                 |...|..       .....||| .::...:|.  ||   |:. .|:...||...:   |:
 Frog   491 -----PVDDNYL-------EYLWEAHE-NILNCLEDC--KVWSAPYD-GQNPDPEISLKALMEDN 539

  Fly   726 IYRGDMP-----QRHMAIMDIGIYAAYGNRESSLQALPETPKT-KTTVLDATESTSSSTALAAAA 784
            ..||:.|     .||           |.:..||     |||.. ..|:||.....|..|.::..:
 Frog   540 CRRGEFPTFRRATRH-----------YMDSFSS-----ETPSLGGKTLLDLEWDDSYDTGMSPDS 588

  Fly   785 SSAVCPWDDPAESVPPPPPPAQVKLSVCPWELDSATETPTAAPAVGSGGGGAGASKILSSTGQP- 848
            .|  |......::|.||.||..::            |....|.....|      |.|..|..|. 
 Frog   589 GS--CSPQPSIDAVLPPEPPHHIQ------------EMKRNAIMFIKG------SYIEESDFQDD 633

  Fly   849 ---MRL------------NSTSSDNSDVNDRM---------QRNLGIRHQNTVDSGEAGIKRLIP 889
               .||            |.|..::.:.||:.         |.|.........|:.:..:|:.:|
 Frog   634 VMVYRLCAVKDAKDADMQNITDKNDIETNDQFTKPQEGNQTQANYNKNANLNEDTVKTQVKQTLP 698

  Fly   890 NIPEQRRASVSFTPSPTPDFQLGRTPTTTSSPTVAPSSSTPLQARSAVYGSGQGIAKDPPSGSDV 954
            .:..|.        ||..|       ..::..|::|.|                        .:.
 Frog   699 KVKIQL--------SPAAD-------DISNMNTLSPDS------------------------EEF 724

  Fly   955 DAELEEELN--KISLGESSISEPPLLVVPTPEQTPPPITKITPPPGESENQADQVIDSTEIPGSS 1017
            .|..::.||  |.|..|..||               ||..:..|..|.|::.|:.  |.::|  .
 Frog   725 IARYDDMLNGLKTSTLEDVIS---------------PIHSLASPMEEDEDEFDKY--SLDLP--Q 770

  Fly  1018 CSTQANQFGEATATVTTVKEVQIELIEQVSGVQTEPDSPPTIKVLV 1063
            ..:..:.||...||:.:         ..:...||.|.:.|.|.|::
 Frog   771 AESIPSPFGPRDATIFS---------NFLPRPQTAPFTGPFISVVL 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42450NP_001259691.1 DEP_RGS7-like 219..306 CDD:239897 20/87 (23%)
RGS_DHEX 303..401 CDD:375589 13/98 (13%)
G-gamma 418..482 CDD:459879 9/66 (14%)
RGS_R7-like 494..614 CDD:188660 32/185 (17%)
fhip1aXP_002933543.3 RAI16-like 87..410 CDD:370927 62/371 (17%)
DUF5917 799..892 CDD:466037 3/9 (33%)
KELAA 950..976 CDD:466035
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.