DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6961 and ALY4

DIOPT Version :9

Sequence 1:NP_573325.1 Gene:CG6961 / 32869 FlyBaseID:FBgn0030959 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_198588.2 Gene:ALY4 / 833750 AraportID:AT5G37720 Length:288 Species:Arabidopsis thaliana


Alignment Length:190 Identity:53/190 - (27%)
Similarity:71/190 - (37%) Gaps:62/190 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 NRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKRRSPSPLSLR------------------------ 358
            :|.:..|.|||          |..|.|:   ||.|..::.|                        
plant    27 SRGRGRGRGGG----------GRGAGPA---RRGPLAVNARPSSFTINKPVRRVRSLPWQSGLFE 78

  Fly   359 -------TSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRPGTAEVIYKSL 410
                   .|..:.|.||.|:||...||..|||||||:||.|      ||......|||||:|...
plant    79 DGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRR 143

  Fly   411 EHAEKAVDTYHHRQFDDQPMHCVLVN-------PHSSRRSVHKAS-----SRTVTTNSSG 458
            ..|.:|:..|::...|.:||...::.       |.|.|.:|:...     .|||.....|
plant   144 SDAFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGRVNVNVTGLNGRLKRTVVIQQGG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6961NP_573325.1 RRM 256..>443 CDD:223796 48/168 (29%)
RRM_SKAR 366..434 CDD:241125 31/73 (42%)
ALY4NP_198588.2 RRM_THOC4 93..167 CDD:410081 31/73 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0533
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19965
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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