Protein Alignment CG6961 and Alyref

DIOPT Version :10

• Sequence 1: NP_573325.1
• Gene: CG6961 / 32869
• FlyBaseID: FBgn0030959
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_001381323.1
• Gene: Alyref / 690585
• RGDID: 1594679
• Length: 256
• Species: Rattus norvegicus
• Alignment Length: 201
• Identity: 56/201 - (27%)
• Similarity: 79/201 - (39%)
• Gaps: 50/201 - (24%)

  Fly   304 KRDPHISHGIYANENRRKAVGGG---GGSDSDSGTDSDGDAAA-------PSKNK---------- 348
            |.|..:...|..|.::|...|||   |.:.|..|......|||       |.:|:
  Rat     4 KMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRGGGPMRNRPAIARGAAGG 68

  Fly   349 --RRSPSPLSLRTSNTKD-------------------GYRLLVSNLHTNVTTADIRELFSDIGPV 392
              |..|:|.| |.....|                   |.:||||||...|:.|||:|||::.|.:
  Rat    69 GGRNRPAPYS-RPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTL 132

  Fly   393 ------YDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPH--SSRRSVHKASS 449
                  ||......|||:|.::....|.||:..|:....|.:||:..||...  :.||.....:.
  Rat   133 KKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSINR 197

  Fly   450 RTVTTN 455
            ..:|.|
  Rat   198 GGMTRN 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6961	NP_573325.1	RRM_SKAR	366..434	CDD:410082	27/73 (37%)
Alyref	NP_001381323.1	RRM_THOC4	107..180	CDD:410081	27/72 (38%)