DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG6961 and Gm6763

DIOPT Version :9

Sequence 1:	NP_573325.1	Gene:	CG6961 / 32869	FlyBaseID:	FBgn0030959	Length:	474	Species:	Drosophila melanogaster
Sequence 2:	NP_001257828.1	Gene:	Gm6763 / 627488	MGIID:	3643573	Length:	264	Species:	Mus musculus

Alignment Length:	193	Identity:	49/193 - (25%)
Similarity:	76/193 - (39%)	Gaps:	36/193 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   285 DTVSTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKR 349
            |.:..:|:.:....|     .|..::.|..:...|.....||            .:..||....:
Mouse    14 DIIKLTKIQQRRHDR-----PDSRVNRGTGSKRYRPAFTHGG------------RNRLAPYCRPK 61

  Fly   350 RSPSPL-------SLRTSNTKD-GYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRP 400
            :.|...       ..|..|..| |.:|.:||||..|:.|||:.||::.|.:      ||......
Mouse    62 QLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSL 126

  Fly   401 GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSRT---VTTN-SSGV 459
            |||:|.::....|.||:..|:....|.:||:..|......|:. ..|.|:.   :|.| .|||
Mouse   127 GTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQG-RPAQSKNRGGMTRNPGSGV 188

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG6961	NP_573325.1	RRM	256..>443	CDD:223796	42/171 (25%)
CG6961	NP_573325.1	RRM_SKAR	366..434	CDD:241125	25/73 (34%)
Gm6763	NP_001257828.1	FYTT	6..>59	CDD:284488	10/61 (16%)
		RRM	<79..>186	CDD:223796	34/107 (32%)
		RRM_THOC4	86..160	CDD:241124	25/73 (34%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900