Protein Alignment CG6961 and alyref

DIOPT Version :9

• Sequence 1: NP_573325.1
• Gene: CG6961 / 32869
• FlyBaseID: FBgn0030959
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_001098578.1
• Gene: alyref / 560127
• ZFINID: ZDB-GENE-070928-29
• Length: 280
• Species: Danio rerio
• Alignment Length: 196
• Identity: 50/196 - (25%)
• Similarity: 77/196 - (39%)
• Gaps: 55/196 - (28%)

  Fly   263 LTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAVGGGG 327
            :.||..:.|..|...|..|       ..:||:..:             |.::.|.....|.||||
Zfish    69 MRNRQNLSRGRSRPAPYSR-------PKQLPDKWQ-------------HDLFDNGYSSNAGGGGG 113

  Fly   328 GSDSDSGTDSDGDAAAPSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV 392
            |....:|.::.|                           :||||||...|:.|||:|||::.|.:
Zfish   114 GGGGGAGVETGG---------------------------KLLVSNLDFGVSDADIQELFAEFGTL 151

  Fly   393 ------YDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPH--SSRRSVHKASS 449
                  ||......|||:|.::....|.||:..|:....|.:||:..||...  :.||:..:..:
Zfish   152 KKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDAQRRTPMQGLN 216

  Fly   450 R 450
            |
Zfish   217 R 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6961	NP_573325.1	RRM	256..>443	CDD:223796	48/187 (26%)
		RRM_SKAR	366..434	CDD:241125	27/73 (37%)
alyref	NP_001098578.1	RRM	<126..>226	CDD:223796	32/92 (35%)
		RRM_THOC4	126..199	CDD:241124	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810