Protein Alignment CG6961 and Alyref2

DIOPT Version :9

• Sequence 1: NP_573325.1
• Gene: CG6961 / 32869
• FlyBaseID: FBgn0030959
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_062357.3
• Gene: Alyref2 / 56009
• MGIID: 1913144
• Length: 218
• Species: Mus musculus
• Alignment Length: 172
• Identity: 50/172 - (29%)
• Similarity: 73/172 - (42%)
• Gaps: 18/172 - (10%)

  Fly   304 KRDPHISHGIYANENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKRRSPSPLSLR---------- 358
            |.|..:...|..|.|:|: |..|||...:....:.|....|:...|..|.|...:
Mouse     4 KMDMSLDDIIKLNRNQRR-VNRGGGPRRNRPAIARGGRNRPAPYSRPKPLPDKWQHDLFDSGCGG 67

  Fly   359 TSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRPGTAEVIYKSLEHAEKAV 417
            ....:.|.:||||||...|:.|||:|||::.|.:      ||......|||:|.::....|.||:
Mouse    68 GEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAM 132

  Fly   418 DTYHHRQFDDQPMHCVLVNPH-SSRRSVHKASSRTVTTNSSG 458
            ..|.....|.:||...||... ..:|...::.:|...|.|.|
Mouse   133 KQYKGVPLDGRPMDIQLVTSQIDPQRRPAQSGNRGGMTRSRG 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6961	NP_573325.1	RRM	256..>443	CDD:223796	45/155 (29%)
		RRM_SKAR	366..434	CDD:241125	27/73 (37%)
Alyref2	NP_062357.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..55		15/51 (29%)
		FYTT	3..>32	CDD:284488	10/28 (36%)
		Sufficient for RNA-binding, interaction with NXF1-NXT1	16..37		7/21 (33%)
		Interaction with HHV-8 ORF57 protein and with ICP27 from HHV-1	54..155		30/100 (30%)
		RRM	<75..>157	CDD:223796	29/81 (36%)
		RRM_THOC4	75..149	CDD:241124	27/73 (37%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	151..218		5/24 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810