Protein Alignment CG6961 and rbmx

DIOPT Version :10

• Sequence 1: NP_573325.1
• Gene: CG6961 / 32869
• FlyBaseID: FBgn0030959
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_997763.1
• Gene: rbmx / 321860
• ZFINID: ZDB-GENE-030131-579
• Length: 379
• Species: Danio rerio
• Alignment Length: 352
• Identity: 79/352 - (22%)
• Similarity: 106/352 - (30%)
• Gaps: 117/352 - (33%)

  Fly    15 RGQRGYR--------PLDRKFNANFSKPRQLLNKPFFKPSGARGSHSDMPAKRTFDARN------ 65
            ||.||.|        |..|              :||||...:||   ..|.||....||
Zfish   107 RGLRGSRGGPSGMRGPPSR--------------EPFFKGMSSRG---PPPMKRGPPERNGGPPPK 154

  Fly    66 -TIAAKTRAKIADARDLINKSVRDSGIDARQLLLERKKARSAGPILIDD--------EEESFEPS 121
             :..:....:.:..||......|      |..|:.|   |..||...||        ....:..|
Zfish   155 RSAPSGPMGRPSRDRDPYGPPPR------RDSLMSR---RDDGPPHRDDHYGSKDSYSSRDYMSS 210

  Fly   122 HRARGKGVHIGQFGHRLSMSNHADGTIQAKWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAP 186
            ..:|..|.....:.:| ..|.|:...      .|.|         ||.|...|...:..|:  .|
Zfish   211 RDSRDYGPPPRDYPYR-EYSGHSSSR------DDYG---------SGSRGYSDRDGYGGGR--EP 257

  Fly   187 RRYIDLDNMQDLED--EEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFS 249
            |.|||..:.....|  :....:......:...|.|| |....:|.||...|........|:
Zfish   258 RGYIDRPSAGSYRDPYDGYGNSRSAPPSRGPPPSYS-GSGGSSRYDDYGSSSRDGYGSRDS---- 317

  Fly   250 IYEAAR------NRIERPSLTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRLFVGKRDPH 308
             |.::|      ||.:||        ||......||||.:         |..
Zfish   318 -YPSSRSDPYSTNRGDRP--------GRQERGPPPLERGY---------PRE------------- 351

  Fly   309 ISHGIYANENRRKAVGGG-GGSDSDSG 334
                 |::.:|....||| ||...|.|
Zfish   352 -----YSSSSRGAPRGGGRGGRRPDRG 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6961	NP_573325.1	RRM_SKAR	366..434	CDD:410082
rbmx	NP_997763.1	RRM_RBMX_like	7..86	CDD:409816
		PABP-1234	<10..204	CDD:130689	29/122 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	57..379		79/352 (22%)