DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6961 and Caper

DIOPT Version :10

Sequence 1:NP_573325.1 Gene:CG6961 / 32869 FlyBaseID:FBgn0030959 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_317010.4 Gene:Caper / 1277542 VectorBaseID:AGAMI1_007869 Length:595 Species:Anopheles gambiae


Alignment Length:490 Identity:98/490 - (20%)
Similarity:165/490 - (33%) Gaps:146/490 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARGSHSDMPAKRTFDARNT 66
            |.|...|...||:|.    |..||.......|.|          ||:.|.:.|...:|:.|    
Mosquito    87 DRDRERDRERERERD----RERDRDGEKASKKHR----------SGSPGRNRDKERRRSKD---- 133

  Fly    67 IAAKTRAKIADARDLINKSVRDSGID---ARQLLLERKKARSAGPILIDDEEESFEPSHRARGKG 128
             .:|:|:.....|.......:|.|..   .|::::|::::|..    :|....|.|..:|.|.: 
Mosquito   134 -RSKSRSPARRDRSKDRSKEKDRGKSDHHRREVVVEKRRSRDR----VDHRRRSRERDYRRRSR- 192

  Fly   129 VHIGQFGHRLSMSNHADGTIQAKWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPR------ 187
                                     |.||    |..|..| ||:..|      ||:..|      
Mosquito   193 -------------------------SRDG----GRGMGRG-RRSMSP------KPYRGRGRGGSG 221

  Fly   188 RYIDLDNMQDLEDEE-ISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSIY 251
            .|.|...::::..|: .:||:...|:.|     .|...||                  ...||..
Mosquito   222 YYRDRSPLEEMSQEDRDARTVFCMQLSQ-----RIHARDL------------------EEFFSSV 263

  Fly   252 EAARNRIERPSLTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRLFVGKRDPHISHGIYAN 316
            ...|:        .||:.  .|.||.                  .:...::..:||         
Mosquito   264 GKVRD--------VRLIT--CNKTKR------------------FKGIAYIEFKDP--------- 291

  Fly   317 ENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTAD 381
            |:...|:|..|  ....|...........||:..|..|:: ...|.....||.|.:||.|:|...
Mosquito   292 ESVALALGLSG--QKLLGIPISVQHTQAEKNRMASQPPVA-PPKNPSGPMRLYVGSLHFNITEDM 353

  Fly   382 IRELFSDIGPVYDARVV-------RPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHS 439
            :..:|...|.:.:.:::       ..|...:.:.:.:.|:||::..:..:...:||.   |...:
Mosquito   354 LNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPMK---VGNVT 415

  Fly   440 SRRSV--HKASSRTVTTNSSGVEVDIDALHSVLFR 472
            .|..|  | ||..|...:.||:|:.......::|:
Mosquito   416 ERLDVTTH-ASLDTDEMDRSGIELGATGRLQLMFK 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6961NP_573325.1 RRM_SKAR 366..434 CDD:410082 15/74 (20%)
CaperXP_317010.4 None

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