DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6961 and LOC1270267

DIOPT Version :10

Sequence 1:NP_573325.1 Gene:CG6961 / 32869 FlyBaseID:FBgn0030959 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_308949.5 Gene:LOC1270267 / 1270267 VectorBaseID:AGAMI1_007420 Length:271 Species:Anopheles gambiae


Alignment Length:206 Identity:49/206 - (23%)
Similarity:69/206 - (33%) Gaps:72/206 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 FSIYEAARNRIERPSL-------TNRLVVGRSNSTKEPLE--------RR---HRDTVSTSKLPE 294
            ::.||.:|:|....|.       :.|...|.|.|.:.|.:        ||   ||.:.||:..  
Mosquito     7 YNYYEPSRSRSRERSYRREYRDDSERYNPGTSESGRTPADYGGSSASYRRSSHHRSSHSTAHY-- 69

  Fly   295 SLRSRLFVGKRDPHISHGIYANENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKRRSPSPLSLRT 359
                      .||..|         ..|.||.....|.||: |.|...                 
Mosquito    70 ----------HDPPAS---------SSASGGAHECSSHSGS-SSGKVV----------------- 97

  Fly   360 SNTKDGYRLLVSNLHTNVTTADIRELFSDIGP------VYDARVVRP-GTAEVIYKSLEHAEKAV 417
                    |.|.||....|.|::.:.||..||      |.||:..|. |...|.::|.|.|:.|.
Mosquito    98 --------LAVFNLSVYTTEAELYDTFSKFGPLRKTTVVLDAKTGRSRGFGFVYFESAEDAKVAH 154

  Fly   418 DTYHHRQFDDQ 428
            |..:..:..|:
Mosquito   155 DQANGIEIGDR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6961NP_573325.1 RRM_SKAR 366..434 CDD:410082 22/70 (31%)
LOC1270267XP_308949.5 None

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