Protein Alignment CG6961 and poldip3

DIOPT Version :9

• Sequence 1: NP_573325.1
• Gene: CG6961 / 32869
• FlyBaseID: FBgn0030959
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: XP_009297280.3
• Gene: poldip3 / 100536140
• ZFINID: ZDB-GENE-120201-2
• Length: 520
• Species: Danio rerio
• Alignment Length: 567
• Identity: 128/567 - (22%)
• Similarity: 196/567 - (34%)
• Gaps: 194/567 - (34%)

  Fly     4 DLSLDEIIERK----RGQ-------RGYRPLDRKFNA----NFSKPRQLLNKPFFKPSGARGSHS 53
            ||||||:|.|:    ||.       ||..||:..|:|    .....||.|.     ..||.|
Zfish    21 DLSLDEVIRRRSFTARGASKRPVYGRGAGPLNMAFDARQKIGSGDVRQRLG-----VGGASG--- 77

  Fly    54 DMPAKRTFDARNTIAAKTRAK-----IADARDLINK-----------------SVRDSGIDARQ- 95
               .||...:.:..|.:|.::     :.|||:.:.:                 ..|..|..|.|
Zfish    78 ---GKRLQISASGAAVQTLSRPSVFPVKDAREKLGQKDARLRLRGRGGGTSAVQSRGGGASAMQD 139

  Fly    96 --LLLERKKARSAGPILIDDEEESFEPSHRARGKG---VHIGQFGHRLSMSNHA----------- 144
              |::..:|.:...|........|..||    |.|   |||    |..|...|.
Zfish   140 ARLMINLRKQQQQQPSASGPAPASARPS----GPGVPHVHI----HNTSPRAHTLTTRVGVALQP 196

  Fly   145 DGTIQAKWDSDD------GVVELGNHMLSGLRRTFDPRSHKPG---------KPFAPRRYIDLDN 194
            .|.|....|:.|      .|....|...:.|:.|...:....|         ...||.|....
Zfish   197 GGGITKVVDARDRLSLKRSVPTTSNQSAASLKITKTIQQRPVGMTSGIRINVPSAAPPRVCAA-- 259

  Fly   195 MQDLEDEEISRTLHLGQMK--QASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAF---SIYEAA 254
            .:|.:::::|..:...|||  .||...:       |...|.:| ||:...:.|:::   |:....
Zfish   260 AEDEDEDDVSAVIPSKQMKITAASSLQT-------RAGPVSLS-APITKVVKNDSYTPPSVSVPP 316

  Fly   255 RNRIERPSLTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRLFVGKRDPHISHGIYANENR 319
            .....||...:...|.|:..|.:|
Zfish   317 ARPAPRPPTQSLQPVSRTTVTTQP----------------------------------------- 340

  Fly   320 RKAVGGGGGSDSDSGTDSDGDAAAPSKNKRRSP--SPLSLRTSNTKDGYRLLVSNLHTNVTTADI 382
                         :|.|:......|::     |  |||        :|.::.|:|||..||..||
Zfish   341 -------------AGRDTSAQTHTPTQ-----PVFSPL--------EGTKITVTNLHPRVTEEDI 379

  Fly   383 RELFSDIGPVYDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHC--------------V 433
            .|||...|.:..||:.:.|.|||::...|.|..|...|::|..|.|||.|              :
Zfish   380 VELFCVCGALKRARLAKVGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLHMQGSVITSDQPI 444

  Fly   434 LV-------NPHSSRRSVHKASSRTVTTNSSGVEVDIDALHSVLFRA 473
            |:       :|.|::::...:|||: :.:||..|||...:...||::
Zfish   445 LLRLSDTPGSPLSAQKASSSSSSRS-SKSSSAAEVDPQTILKALFKS 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6961	NP_573325.1	RRM	256..>443	CDD:223796	45/209 (22%)
		RRM_SKAR	366..434	CDD:241125	28/81 (35%)
poldip3	XP_009297280.3	RRM_SKAR	363..431	CDD:241125	28/67 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170583240
Domainoid	1	1.000	50	1.000	Domainoid score	I11681
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1462536at2759
OrthoFinder	1	1.000	-	-		FOG0007107
OrthoInspector	1	1.000	-	-		otm26348
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.940