DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6961 and Alyreffm6

DIOPT Version :10

Sequence 1:NP_573325.1 Gene:CG6961 / 32869 FlyBaseID:FBgn0030959 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001160110.1 Gene:Alyreffm6 / 100043231 MGIID:3782483 Length:289 Species:Mus musculus


Alignment Length:192 Identity:50/192 - (26%)
Similarity:73/192 - (38%) Gaps:34/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 DTVSTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKR 349
            |.:..:|:.:..|.|     .|..:..|......|.....||            .:..||....:
Mouse    14 DIIKLNKMQQGRRDR-----PDSRVKRGTGPKRYRPAFTHGG------------RNRLAPYCRPK 61

  Fly   350 RSPSPL-------SLRTSNTKD-GYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRP 400
            :.|...       ..|..|..| |.:|.:||||..|:.|||:.||::.|.:      ||......
Mouse    62 QLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSL 126

  Fly   401 GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSR--RSVHKASSRTVTTN-SSGV 459
            |||.|.::....|.||:..|:....|.:||:..||.....|  |....:....:|.| .|||
Mouse   127 GTAHVHFERKADALKAMREYNGAPLDGRPMNIHLVTSQIDRQGRPALNSDKGGMTRNPGSGV 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6961NP_573325.1 RRM_SKAR 366..434 CDD:410082 25/73 (34%)
Alyreffm6NP_001160110.1 FYTT 6..>66 CDD:462082 12/68 (18%)
RRM_THOC4 86..160 CDD:410081 25/73 (34%)

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