DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and NSR1

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_011675.1 Gene:NSR1 / 853064 SGDID:S000003391 Length:414 Species:Saccharomyces cerevisiae


Alignment Length:135 Identity:30/135 - (22%)
Similarity:58/135 - (42%) Gaps:19/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 ENRRKAVGGGGARDSDSGTDSDGDAAAPSKN--KRRS----------PSPLSLRTSNTKDGYRLL 369
            |.:::......:.||.|.:.||.::.....|  ||:|          .|....:...|::...:.
Yeast   107 ETKKEESKESSSSDSSSSSSSDSESEKEESNDKKRKSEDAEEEEDEESSNKKQKNEETEEPATIF 171

  Fly   370 VSNLHTNVTTADIRELFSDIGPVYDARVV-------RPGTAEVIYKSLEHAEKAVDTYHHRQFDD 427
            |..|..::....:::.|..||.|..|||:       ..|...|.:::..:||||:.....::.|.
Yeast   172 VGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDG 236

  Fly   428 QPMHC 432
            :|::|
Yeast   237 RPINC 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 18/74 (24%)
NSR1NP_011675.1 RRM1_gar2 169..244 CDD:409881 18/73 (25%)
RRM2_gar2 269..341 CDD:409882
Blue background indicates that the domain is not in the aligned region.

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