DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and SR45

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001185014.1 Gene:SR45 / 838230 AraportID:AT1G16610 Length:425 Species:Arabidopsis thaliana


Alignment Length:158 Identity:43/158 - (27%)
Similarity:64/158 - (40%) Gaps:23/158 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 EPLERRHRDTASTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAVGGGG--ARDSDSGTDS-- 337
            :|...|...:.|.|....|.|||   ....|  |..|..:.:|.:::....  :|...||:.|  
plant     3 KPSRGRRSPSVSGSSSRSSSRSR---SGSSP--SRSISRSRSRSRSLSSSSSPSRSVSSGSRSPP 62

  Fly   338 --DGDAAAPSKNKRRSPSPLSLRTSN-----TKDGYRLLVSNLHTNVTTADIRELFSDIGPV--- 392
              ....|.|::..|..|.|.|...|:     .::...|.|.:|..||..|.::|:|.:.|.|   
plant    63 RRGKSPAGPARRGRSPPPPPSKGASSPSKKAVQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHV 127

  Fly   393 ---YDARVVRP-GTAEVIYKSLEHAEKA 416
               .|..|..| |...|.:|:...||||
plant   128 EIAMDRAVNLPRGHGYVEFKARADAEKA 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 20/58 (34%)
SR45NP_001185014.1 RRM_RNPS1 100..172 CDD:409800 20/56 (36%)

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