DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG18259 and AT5G59950

DIOPT Version :9

Sequence 1:	NP_573324.1	Gene:	CG18259 / 32866	FlyBaseID:	FBgn0030956	Length:	474	Species:	Drosophila melanogaster
Sequence 2:	NP_001190572.1	Gene:	AT5G59950 / 836117	AraportID:	AT5G59950	Length:	245	Species:	Arabidopsis thaliana

Alignment Length:	179	Identity:	46/179 - (25%)
Similarity:	73/179 - (40%)	Gaps:	46/179 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   317 ENRRKAVGGGGARDSDSGTDSDGDAAAPSKNKRRSPSPLSLR----------------------- 358
            :||:...|.|.||.:.||       :.|...:|.:|:..|.|
plant    15 KNRKSRGGAGPARGTGSG-------SGPGPTRRNNPNRKSTRSAPYQSAKAPESTWGHDMFSDRS 72

  Fly   359 --------TSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRPGTAEVIYKS 409
                    ::..:.|.:|.:|||...|...||:|||:::|.:      :|......|||||:|..
plant    73 EDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSR 137

  Fly   410 LEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSRTVTTNSSG 458
            ...|..||..|:..|.|.:||...:|.  ::.::....|.|....||:|
plant   138 RGDALAAVKKYNDVQLDGKPMKIEIVG--TNLQTAAAPSGRPANGNSNG 184

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG18259	NP_573324.1	RRM	<345..>443	CDD:223796	32/134 (24%)
CG18259	NP_573324.1	RRM_SKAR	366..434	CDD:241125	26/73 (36%)
AT5G59950	NP_001190572.1	RRM_THOC4	88..162	CDD:410081	26/73 (36%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR19965
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.960