DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18259 and ALY4

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_198588.2 Gene:ALY4 / 833750 AraportID:AT5G37720 Length:288 Species:Arabidopsis thaliana


Alignment Length:192 Identity:54/192 - (28%)
Similarity:71/192 - (36%) Gaps:55/192 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 RRKAVGGGG---ARDSDSGTDSDGDAAAPSKNKRRSPSPLSLR---------------------- 358
            |.|....||   :|....|....|..|.|:   ||.|..::.|                      
plant    15 RGKTARSGGRGISRGRGRGRGGGGRGAGPA---RRGPLAVNARPSSFTINKPVRRVRSLPWQSGL 76

  Fly   359 ---------TSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRPGTAEVIYK 408
                     .|..:.|.||.|:||...||..|||||||:||.|      ||......|||||:|.
plant    77 FEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYP 141

  Fly   409 SLEHAEKAVDTYHHRQFDDQPMHCVLVN-------PHSSRRSVHKAS-----SRTVTTNSSG 458
            ....|.:|:..|::...|.:||...::.       |.|.|.:|:...     .|||.....|
plant   142 RRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGRVNVNVTGLNGRLKRTVVIQQGG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 31/73 (42%)
ALY4NP_198588.2 RRM_THOC4 93..167 CDD:410081 31/73 (42%)

Return to query results.
Submit another query.