Protein Alignment CG18259 and LIF2

DIOPT Version :9

• Sequence 1: NP_573324.1
• Gene: CG18259 / 32866
• FlyBaseID: FBgn0030956
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_001031566.1
• Gene: LIF2 / 827998
• AraportID: AT4G00830
• Length: 495
• Species: Arabidopsis thaliana
• Alignment Length: 319
• Identity: 70/319 - (21%)
• Similarity: 119/319 - (37%)
• Gaps: 79/319 - (24%)

  Fly   189 YIDLDNMQD-------LEDEEISRTLHLGQMKQASPRYSIGGLDLNRGDD------------VEM 234
            :||::...|       ::||:..:..||..:........||||..:.|::            .|:
plant    81 HIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEV 145

  Fly   235 SMAPLNNKIDNN-----AFSIYEAARNRIE------------RPSLT---NRLVVGR--SNTTKE 277
            .:....:..|:.     ||...:.|:..||            |.||:   |||.:|.  .|.|::
plant   146 RLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTED 210

  Fly   278 PLERRHRDTASTSKLPESLRSRLFVGKRDPHISHGIYANE-----NRRKAVGGGGARDSDSGTDS 337
            ...:...|.....:..|.::..... .|:...:..:|.|.     :|:|.:        ||....
plant   211 EFRKVIEDVGPGVENIELIKDPTNT-TRNRGFAFVLYYNNACADYSRQKMI--------DSNFKL 266

  Fly   338 DGDA-----AAPSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARV 397
            :|:|     |.|..:...|.:...::.        |.|.|:..|.:|..::|||...|.|  .::
plant   267 EGNAPTVTWADPKSSPEHSAAAAQVKA--------LYVKNIPENTSTEQLKELFQRHGEV--TKI 321

  Fly   398 VRP----GTAE---VIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASS 449
            |.|    |..:   |.|.....|.|||......:.:.||:..||..|.:.|:  |..||
plant   322 VTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERK--HDPSS 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18259	NP_573324.1	RRM	<345..>443	CDD:223796	26/104 (25%)
		RRM_SKAR	366..434	CDD:241125	21/74 (28%)
LIF2	NP_001031566.1	hnRNP-R-Q	112..>430	CDD:273732	63/288 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000