Protein Alignment CG18259 and Ref2

DIOPT Version :10

• Sequence 1: NP_573324.1
• Gene: CG18259 / 32866
• FlyBaseID: FBgn0030956
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_609574.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Alignment Length: 181
• Identity: 42/181 - (23%)
• Similarity: 70/181 - (38%)
• Gaps: 35/181 - (19%)

  Fly   301 FVGKRDPHISHGIYANENRRKAVGG-GGARDSDSGTDSDGDAAAPSKNKRRSPSPLSLRTSNTKD 364
            ||..::..:..|   :..:|.:.|| .|.:.|.:||.....:....:...:.|...:|
  Fly    22 FVNAKNERVQGG---SIRKRNSEGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTL------- 76

  Fly   365 GYRLLVSNLHTNVTTADIRELFSDIGPV------YDARVVRPGTAEVIYKSLEHAEKAVDTYHHR 423
               ::|.||...|...||.|||:..|.|      ||......|||.:.:|..|.|.:.::.:|..
  Fly    77 ---VMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGV 138

  Fly   424 QFDDQPMHCVLVNPHSSRRSVHKASSRTVTTNSSGVEVDIDALHSVLFRVR 474
            :.|.:            |..:|...:   |.|....:||..:|....|:.|
  Fly   139 RLDGR------------RLKLHLVQN---TRNFKRTDVDDLSLRMGSFKTR 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18259	NP_573324.1	RRM_SKAR	366..434	CDD:410082	21/73 (29%)
Ref2	NP_609574.1	RRM_SF	75..149	CDD:473069	23/95 (24%)