DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and CG6961

DIOPT Version :9

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_573325.1 Gene:CG6961 / 32869 FlyBaseID:FBgn0030959 Length:474 Species:Drosophila melanogaster


Alignment Length:474 Identity:468/474 - (98%)
Similarity:469/474 - (98%) Gaps:0/474 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARGSHSDTPAKRTFDARN 65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
  Fly     1 MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARGSHSDMPAKRTFDARN 65

  Fly    66 TIAAKTRAKIADARDLINKSVRDSGIDARQLLLERKKARSAGPILIDDEEESFEPSHRARGKGVH 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 TIAAKTRAKIADARDLINKSVRDSGIDARQLLLERKKARSAGPILIDDEEESFEPSHRARGKGVH 130

  Fly   131 IGQFGHRLSMSNHADGTIQAKWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNM 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 IGQFGHRLSMSNHADGTIQAKWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNM 195

  Fly   196 QDLEDEEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSIYEAARNRIER 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 QDLEDEEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSIYEAARNRIER 260

  Fly   261 PSLTNRLVVGRSNTTKEPLERRHRDTASTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAVGG 325
            |||||||||||||:||||||||||||.||||||||||||||||||||||||||||||||||||||
  Fly   261 PSLTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAVGG 325

  Fly   326 GGARDSDSGTDSDGDAAAPSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIG 390
            ||..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 GGGSDSDSGTDSDGDAAAPSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIG 390

  Fly   391 PVYDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSRTVTTN 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   391 PVYDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSRTVTTN 455

  Fly   456 SSGVEVDIDALHSVLFRVR 474
            |||||||||||||||||.|
  Fly   456 SSGVEVDIDALHSVLFRAR 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM <345..>443 CDD:223796 97/97 (100%)
RRM_SKAR 366..434 CDD:241125 67/67 (100%)
CG6961NP_573325.1 RRM 256..>443 CDD:223796 182/186 (98%)
RRM_SKAR 366..434 CDD:241125 67/67 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452252
Domainoid 1 1.000 50 1.000 Domainoid score I11681
eggNOG 1 0.900 - - E1_KOG0533
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I6838
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1462536at2759
OrthoFinder 1 1.000 - - FOG0007107
OrthoInspector 1 1.000 - - otm26348
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19965
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X13545
98.990

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