DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and mlo3

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_595715.1 Gene:mlo3 / 2540565 PomBaseID:SPBC1D7.04 Length:199 Species:Schizosaccharomyces pombe


Alignment Length:130 Identity:36/130 - (27%)
Similarity:62/130 - (47%) Gaps:13/130 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 PSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELF-SDIGP------VYDARVVRPG 401
            |:||.:.:.:..|...|...:..:::||||.|:||.|.::||| ..|||      .|.......|
pombe    33 PTKNAKPAVNTASALKSVISEESKIIVSNLPTDVTEAQVKELFVKSIGPCKRVSLAYGPNGRSKG 97

  Fly   402 TAEVIYKSLEHAEKAVDTYHHRQFD-DQPMHC-VLVNP----HSSRRSVHKASSRTVTTNSSGVE 460
            .|.:|:.....|.:|.:.|..|..| .:.|.. ::::|    :|....|..||:.:.|.:.:|.:
pombe    98 IATIIFSRPGDATRAYEQYEGRLVDGTRKMKVEIILDPSRQLNSLAARVSPASNASATASKNGAK 162

  Fly   461  460
            pombe   163  162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 24/76 (32%)
mlo3NP_595715.1 RRM_YRA1_MLO3 55..132 CDD:409711 24/76 (32%)

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