DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and Rbmxl1

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_033059.2 Gene:Rbmxl1 / 19656 MGIID:1343045 Length:388 Species:Mus musculus


Alignment Length:383 Identity:86/383 - (22%)
Similarity:133/383 - (34%) Gaps:125/383 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DTPAKRTFDARNTIAAKTRAKIADARDLINKSVRDSGIDARQLLLERKKARSAGPILIDDEEESF 118
            :|...|.| |..|..:...||.| |||:..||:....|...|......::...||          
Mouse    44 ETNKSRGF-AFVTFESPADAKDA-ARDMNGKSLDGKAIKVEQATKPSFESGRRGP---------- 96

  Fly   119 EPSHRARG--KGVHIGQFGHRLSMSNHADGTIQAKWDSDDGVVELGNHMLSG-----LRRTFDPR 176
            .|..|:||  :|:..|..|.|        |........|||...:..:|.|.     ::|...||
Mouse    97 PPPPRSRGPPRGLRGGSGGTR--------GPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPR 153

  Fly   177 SHKPGKPFAPRRYIDLDNMQDLEDEEISRTLHLGQMKQASPRYSIGG-LDLNRGDDV---EMSMA 237
            |..|    .|:                 |:...|.::.:|   .:|| ..::||.|.   .....
Mouse   154 SGGP----PPK-----------------RSTPSGPVRSSS---GMGGRTPVSRGRDSYGGPPRRE 194

  Fly   238 PLNNKID------NNAFSIYEAARNRIERPSLTNRLVVGRSNTTKE----PLERRHRDTASTSKL 292
            ||.::.|      ::.:|..::..:| :.||         |..|::    |.:..:||.:.:|. 
Mouse   195 PLPSRRDVYLSPRDDGYSTKDSYSSR-DYPS---------SRDTRDYAPPPRDYTYRDYSHSSS- 248

  Fly   293 PESLRSRLFVGKRD---------PHISHGIYANE-----NRRKA---------VGG--------- 325
            .:...||.: |.||         .|.|.|.|.:.     |.|.|         .||         
Mouse   249 RDDYPSRGY-GDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSS 312

  Fly   326 -----GGARDSDSGTDSD-----------GDAAAPSKNKRRSPSPLSLRTSNTKDGYR 367
                 ||:|||.|.:.||           .:...|...:|..|.|....:|:::...|
Mouse   313 SRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPR 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 1/2 (50%)
Rbmxl1NP_033059.2 RRM_RBMX_like 7..86 CDD:409816 15/43 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..388 81/367 (22%)
RBM1CTR 170..214 CDD:400429 10/46 (22%)

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