DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and Myef2

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001155889.1 Gene:Myef2 / 17876 MGIID:104592 Length:591 Species:Mus musculus


Alignment Length:330 Identity:64/330 - (19%)
Similarity:111/330 - (33%) Gaps:80/330 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 DNMQDLEDEEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDN----NAFSIYEA 253
            |:....:..|..|..|.|: .:..||.|..|:.:...:.|:...:.|..|...    |.|..|..
Mouse    13 DDGSQQQPAEPRRDTHPGE-PEKPPRSSANGVKMENDESVKEEKSDLKEKSTGNKKANRFHPYSK 76

  Fly   254 ARN----RIERPSLTNRLVVG------RSNTTKEPLERR------------------------HR 284
            .:|    ..:.|: .||:.:.      :....|:.:..:                        .:
Mouse    77 DKNSGTGEKKGPN-RNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFK 140

  Fly   285 DTASTSKLPESLRSRLFVG-----KRDPHISHGIYANENRRKAVGGGGARDSDSGTDSDGDAAA- 343
            |.....|..|::......|     |.||.       .||.|:|:       ..:||...|..|: 
Mouse   141 DEEFVKKALETMNKYDLSGRPLNIKEDPD-------GENARRAL-------QRTGTSFQGSHASD 191

  Fly   344 ---------PS-KNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVV 398
                     || .|....|..:.......:.|..:.|:||...|....::|:||..|.|..|.:.
Mouse   192 VGSGLVNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIK 256

  Fly   399 RP------GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVN---PHSSRRSVHKASSRTVTT 454
            ..      |...|.::....|.:|:..::.:...|:|||..:.:   ||...|| |.:.:..:..
Mouse   257 EDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRS-HDSKTSQLPR 320

  Fly   455 NSSGV 459
            ...|:
Mouse   321 GLGGI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 18/73 (25%)
Myef2NP_001155889.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..92 17/80 (21%)
RRM1_MYEF2 92..167 CDD:410059 7/74 (9%)
PABP-1234 115..>587 CDD:130689 44/226 (19%)
RRM2_MYEF2 224..299 CDD:410061 18/74 (24%)
RRM3_MYEF2 515..591 CDD:410063
Blue background indicates that the domain is not in the aligned region.

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