Protein Alignment CG18259 and aly-3

DIOPT Version :10

• Sequence 1: NP_573324.1
• Gene: CG18259 / 32866
• FlyBaseID: FBgn0030956
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: NP_001076697.1
• Gene: aly-3 / 178157
• WormBaseID: WBGene00000122
• Length: 240
• Species: Caenorhabditis elegans
• Alignment Length: 350
• Identity: 64/350 - (18%)
• Similarity: 100/350 - (28%)
• Gaps: 134/350 - (38%)

  Fly     2 DIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKP--SGARGSHSDTPAKRTFDAR 64
            ::||||::||.:.|...|  .:.:|   :|...|:...:|...|  ||..|...|..|.:
 Worm     6 NVDLSLEDIISKTRKTTG--SIQKK---SFGGARRGNTRPTGLPRRSGGSGGWKDLDAVQ----- 60

  Fly    65 NTIAAKTRAKIADARDLINKSVRDSGIDARQLLLERKKARSAGPILIDDEEESFEPSHRARGKGV 129
                              |..:...|.|::.:   |....:..|.:|..:.|.....:|.....|
 Worm    61 ------------------NHGISSRGNDSKVI---RVNISNLAPTVISSDLEELFGDYRLSSVSV 104

  Fly   130 HIGQFGHRLSMSNHADGTIQ-AKWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLD 193
            :..:.|..|     ..|.|. .|.|::..|.:.....|.|....|              ..||..
 Worm   105 NFNEHGDSL-----GTGDISLTKRDAERLVQKFSGVALDGKIMKF--------------AVIDSS 150

  Fly   194 NMQDLEDEEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSIYEAARNRI 258
            ||....|        .|...::||
 Worm   151 NMAGRVD--------FGNRSRSSP----------------------------------------- 166

  Fly   259 ERPSLTNRLVVGRSNTTKEPLERRHRDTASTSKLPESLRSRLFVGKRDPHISHGIYANENRRKAV 323
                       |||:...:...||:.                  ||.:..:..|::|.:.:|...
 Worm   167 -----------GRSSRGFQSGPRRNN------------------GKPEDFLRDGVHAGDIKRGGA 202

  Fly   324 GGGGARDSDSGTDSDGDAAAPSKNK 348
            |.||.|....|...|   |.|.|.:
 Worm   203 GRGGFRKGGRGGARD---AKPKKTE 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18259	NP_573324.1	RRM_SKAR	366..434	CDD:410082
aly-3	NP_001076697.1	RRM_Aly_REF_like	74..146	CDD:409852	16/93 (17%)