DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and C02B10.4

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_500722.1 Gene:C02B10.4 / 177283 WormBaseID:WBGene00015329 Length:211 Species:Caenorhabditis elegans


Alignment Length:132 Identity:33/132 - (25%)
Similarity:52/132 - (39%) Gaps:30/132 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 RRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVR---------PGTAE 404
            |...:|..:|..:|... .|::.||.|.||..|:.|||..    |:..:|:         .|.|:
 Worm    77 RGRTAPAVVREIHTGPS-TLIIKNLATTVTQEDLEELFEQ----YEPELVQLHYGPTGESNGCAD 136

  Fly   405 VIYKSLEHAEKAV--DTYHHRQFDDQPMHCVLVNPHS-----------SRRSVHKASSRTVTTNS 456
            :|   :.||:.|:  ........|.:|:..:..||..           ||.:..||.:..|...|
 Worm   137 LI---VPHAQVAIIQKALEGVLLDGEPIEVLEANPPKQVSVFDRIKKVSRGNDFKAKNMRVVVKS 198

  Fly   457 SG 458
            .|
 Worm   199 KG 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082 20/78 (26%)
C02B10.4NP_500722.1 RRM_Aly_REF_like 93..163 CDD:409852 20/77 (26%)

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