DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18259 and CIRBP

DIOPT Version :10

Sequence 1:NP_573324.1 Gene:CG18259 / 32866 FlyBaseID:FBgn0030956 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001287758.1 Gene:CIRBP / 1153 HGNCID:1982 Length:297 Species:Homo sapiens


Alignment Length:220 Identity:51/220 - (23%)
Similarity:81/220 - (36%) Gaps:43/220 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNMQDLEDEEISRTLHLGQMKQASPR 218
            ||:|.:.:|     ||  :||.......:.|:  :|..:..:..::|.|..|:            
Human     3 SDEGKLFVG-----GL--SFDTNEQSLEQVFS--KYGQISEVVVVKDRETQRS------------ 46

  Fly   219 YSIGGLDLNRGDDVEMSMAPLNNK-IDNNAFSIYEAARNRIERP------SLTNRLVVGRSNTTK 276
            ...|.:.....||.:.:|..:|.| :|.....:.:|.::...|.      |...|..........
Human    47 RGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRG 111

  Fly   277 EPLERRHRDTASTSKLPESLRSRLFVGKRDPHISH---GIYANENRRKAVGGGGARDS-DSGTDS 337
            ....|...|........|| ||..:.|.||.:.|.   |.|::.:     .||..||| ||...|
Human   112 RGFSRGGGDRGYGGNRFES-RSGGYGGSRDYYSSRSQSGGYSDRS-----SGGSYRDSYDSYGKS 170

  Fly   338 DGDAAA---PSKNKRRS--PSPLSL 357
            ..:.|.   |:...|.:  |||.:|
Human   171 HSEGATLLWPAVGARFTLVPSPSTL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18259NP_573324.1 RRM_SKAR 366..434 CDD:410082
CIRBPNP_001287758.1 RRM_CIRBP_RBM3 6..85 CDD:409883 19/99 (19%)
Blue background indicates that the domain is not in the aligned region.

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