Protein Alignment CG18259 and poldip3

DIOPT Version :10

• Sequence 1: NP_573324.1
• Gene: CG18259 / 32866
• FlyBaseID: FBgn0030956
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: XP_009297280.4
• Gene: poldip3 / 100536140
• ZFINID: ZDB-GENE-120201-2
• Length: 502
• Species: Danio rerio
• Alignment Length: 564
• Identity: 128/564 - (22%)
• Similarity: 197/564 - (34%)
• Gaps: 190/564 - (33%)

  Fly     4 DLSLDEIIERK----RGQ-------RGYRPLDRKFNA----NFSKPRQLLNKPFFKPSGARGSHS 53
            ||||||:|.|:    ||.       ||..||:..|:|    .....||.|.     ..||.|
Zfish     3 DLSLDEVIRRRSFTARGASKRPVYGRGAGPLNMAFDARQKIGSGDVRQRLG-----VGGASG--- 59

  Fly    54 DTPAKRTFDARNTIAAKTRAK-----IADARDLINK-----------------SVRDSGIDARQ- 95
               .||...:.:..|.:|.::     :.|||:.:.:                 ..|..|..|.|
Zfish    60 ---GKRLQISASGAAVQTLSRPSVFPVKDAREKLGQKDARLRLRGRGGGTSAVQSRGGGASAMQD 121

  Fly    96 --LLLERKKARSAGPILIDDEEESFEPSHRARGKG---VHIGQFGHRLSMSNHA----------- 144
              |::..:|.:...|........|..||    |.|   |||    |..|...|.
Zfish   122 ARLMINLRKQQQQQPSASGPAPASARPS----GPGVPHVHI----HNTSPRAHTLTTRVGVALQP 178

  Fly   145 DGTIQAKWDSDD------GVVELGNHMLSGLRRTFDPRSHKPG---------KPFAPRRYIDLDN 194
            .|.|....|:.|      .|....|...:.|:.|...:....|         ...||.|....
Zfish   179 GGGITKVVDARDRLSLKRSVPTTSNQSAASLKITKTIQQRPVGMTSGIRINVPSAAPPRVCAA-- 241

  Fly   195 MQDLEDEEISRTLHLGQMK--QASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAF---SIYEAA 254
            .:|.:::::|..:...|||  .||...:       |...|.:| ||:...:.|:::   |:....
Zfish   242 AEDEDEDDVSAVIPSKQMKITAASSLQT-------RAGPVSLS-APITKVVKNDSYTPPSVSVPP 298

  Fly   255 RNRIERPSLTNRLVVGRSNTTKEPLERRHRDTASTSKLPESLRSRLFVGKRDPHISHGIYANENR 319
            .....||...:...|.|:..|.:|   ..|||::.:..|                :..::
Zfish   299 ARPAPRPPTQSLQPVSRTTVTTQP---AGRDTSAQTHTP----------------TQPVF----- 339

  Fly   320 RKAVGGGGARDSDSGTDSDGDAAAPSKNKRRSPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRE 384
                                             |||        :|.::.|:|||..||..||.|
Zfish   340 ---------------------------------SPL--------EGTKITVTNLHPRVTEEDIVE 363

  Fly   385 LFSDIGPVYDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHC--------------VLV 435
            ||...|.:..||:.:.|.|||::...|.|..|...|::|..|.|||.|              :|:
Zfish   364 LFCVCGALKRARLAKVGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLHMQGSVITSDQPILL 428

  Fly   436 -------NPHSSRRSVHKASSRTVTTNSSGVEVDIDALHSVLFR 472
                   :|.|::::...:|||: :.:||..|||...:...||:
Zfish   429 RLSDTPGSPLSAQKASSSSSSRS-SKSSSAAEVDPQTILKALFK 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18259	NP_573324.1	RRM_SKAR	366..434	CDD:410082	28/81 (35%)
poldip3	XP_009297280.4	RRM_SKAR	345..413	CDD:410082	28/67 (42%)