DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCKLR-17D3 and galr2b

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001410737.1 Gene:galr2b / 798737 ZFINID:ZDB-GENE-131121-48 Length:378 Species:Danio rerio


Alignment Length:478 Identity:109/478 - (22%)
Similarity:179/478 - (37%) Gaps:138/478 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SSSPSPSSTPASSSSTSTGMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRM-RTITNVFLLNLA 154
            ::|.|....|||         |.:...:|:|.|...:||.||::.|:::.:: ...||:|:|||:
Zfish    15 NASESYQLNPAS---------VIVSVVFSLIFLLGTIGNSLVLAVLLRSGQVGYNTTNLFILNLS 70

  Fly   155 ISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRS 219
            ::|....:.|:|.......|..::||.|:||:..|....::..||:||.|:|.:||.||.:||||
Zfish    71 VADFFFIIFCVPFQATIYSLEGWVFGSFMCKVVHFFINLTMYASSFTLAAVSVDRYLAIRYPLRS 135

  Fly   220 RSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCKCREFWPDQGYELFYNILLD--- 281
            |..:|..:|...:..||...::...|...:..||.......|.       .|:|.....:||   
Zfish   136 RELRTPCNAVVAMVVIWGLSLVFAGPYLSYYDLIDFENSNVCV-------PGWEEHNRKVLDTCT 193

  Fly   282 FLL-LVLPLLVLCVAYILITRTL-YVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILV 344
            |:. .|:|:|::.::|   |||: |:..|.|                    |..|.|.|.     
Zfish   194 FVFGYVIPVLIVSLSY---TRTIKYLWTAVD--------------------PLDGMSESK----- 230

  Fly   345 LTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVH 409
                                                                             
Zfish   231 ----------------------------------------------------------------- 230

  Fly   410 DAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFLQL 474
                         .:|::|.||:.::.:.|.|||.|.:|: .:..|.|...:....|........
Zfish   231 -------------RAKRKVTKMIIIVTVLFCICWLPYHVV-ILCYLYGDFPFNQTTYAFRLLSHC 281

  Fly   475 LAYSSSCCNPITYCFMNASFRRAFVDTFKGLPWRRG------AGASGGVGGAAGGGLSASQAGAG 533
            :||::||.|||.|..::..||:.|...|..:..::|      ...:..|.|...|....||... 
Zfish   282 MAYANSCLNPIVYALVSKHFRKGFKKVFSCILSKKGRNKVHVVNVANTVPGFEAGSTEVSQMNE- 345

  Fly   534 PGAYASANTNISLNPGLAMGMGT 556
              ..|..|.:..:|..||....|
Zfish   346 --ENARQNESEMVNRPLAQPQDT 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 90/391 (23%)
TM helix 1 114..138 CDD:320334 8/23 (35%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 2/15 (13%)
TM helix 5 274..297 CDD:320334 6/26 (23%)
TM helix 6 429..451 CDD:320334 8/21 (38%)
TM helix 7 466..491 CDD:320334 9/24 (38%)
galr2bNP_001410737.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 90/391 (23%)
TM helix 1 28..54 CDD:320225 8/25 (32%)
TM helix 2 62..88 CDD:320225 9/25 (36%)
TM helix 3 100..130 CDD:320225 12/29 (41%)
TM helix 4 142..162 CDD:320225 3/19 (16%)
TM helix 5 186..215 CDD:320225 10/31 (32%)
TM helix 6 231..261 CDD:320225 10/30 (33%)
TM helix 7 273..298 CDD:320225 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..362 6/25 (24%)

Return to query results.
Submit another query.