DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and npy2rl

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001314731.1 Gene:npy2rl / 795311 ZFINID:ZDB-GENE-111115-4 Length:373 Species:Danio rerio


Alignment Length:425 Identity:103/425 - (24%)
Similarity:172/425 - (40%) Gaps:117/425 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SLGTSSSPSPSSTPASSSSTST---GMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNV 148
            |:|..||....:.|......||   |:.|.||.:||.|:|..|:||.|||..:.:.:.:||:||.
Zfish    17 SIGEDSSDLTLNHPLLELGDSTKLLGVQVVLILAYSTIILLGVVGNSLVIYVVYKFKTLRTVTNF 81

  Fly   149 FLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAI 213
            |:.|||::|:|:..||:|.||..||||.:.||:.||....::|..:|.||:.||..|:.:|:..|
Zfish    82 FIANLAVADLLVNTLCLPFTLAYTLLREWKFGQVLCFTLPYAQGLAVHVSTITLNVIALDRHRCI 146

  Fly   214 CHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQ--LIPTSRPGYCK-CREFWPDQGYE-L 274
            .:.|.:|  .:....:.:|...|:...:..:|:|:|.:  ::..|.....: |.|.|||...: .
Zfish   147 VYHLDTR--MSKDTCFLVIAITWVVSAVLASPLAIFREYGIVDLSPDNSIEVCGEKWPDSSTDST 209

  Fly   275 FYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSS 339
            .|:|....|..||||.::..|||.|...|                                    
Zfish   210 LYSISTLLLQYVLPLAIISFAYIRIWSKL------------------------------------ 238

  Fly   340 NCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSP 404
                                                                             
Zfish   239 ----------------------------------------------------------------- 238

  Fly   405 SIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAI 469
              |.|.:.:.|::..   ..:::..|||..:|:.|.:.|.|.:... :.:.|...|.:..|:..:
Zfish   239 --RNHVSPVGRNDRH---HRRRKTTKMLVTMVVVFAVSWLPFHAFQ-LAIDIDHSVLDMKDFRLL 297

  Fly   470 -SFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFK 503
             :...::|..|:..||:.|.:||.::|.|||..|:
Zfish   298 YTVFHIVAMCSTFANPLLYGWMNRNYRSAFVAVFR 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 91/390 (23%)
TM helix 1 114..138 CDD:320334 12/23 (52%)
TM helix 2 147..169 CDD:320334 10/21 (48%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 2/15 (13%)
TM helix 5 274..297 CDD:320334 8/22 (36%)
TM helix 6 429..451 CDD:320334 7/21 (33%)
TM helix 7 466..491 CDD:320334 5/25 (20%)
npy2rlNP_001314731.1 7tm_GPCRs 45..327 CDD:475119 91/390 (23%)
TM helix 1 47..71 CDD:410628 12/23 (52%)
TM helix 2 80..102 CDD:410628 10/21 (48%)
TM helix 3 118..140 CDD:410628 7/21 (33%)
TM helix 4 161..177 CDD:410628 2/15 (13%)
TM helix 5 209..232 CDD:410628 8/22 (36%)
TM helix 6 258..280 CDD:410628 7/22 (32%)
TM helix 7 295..320 CDD:410628 5/24 (21%)

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