DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and prlhr2a

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001034615.1 Gene:prlhr2a / 654782 ZFINID:ZDB-GENE-060209-1 Length:370 Species:Danio rerio


Alignment Length:414 Identity:106/414 - (25%)
Similarity:162/414 - (39%) Gaps:120/414 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTL-LRNF 177
            :||.|::::|..|.||.|::..:.|.::|..:||.|:.|||.||||:...|:|.||.... .|.:
Zfish    61 IIPCYALVVLVGVFGNYLLLYVICQTKKMHNVTNFFIGNLAFSDMLMCATCVPFTLAYAFNPRGW 125

  Fly   178 IFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILC 242
            :||.|:|.|....|..:|.||.:||.||..:||||..|||:.|. ..::..|.:.| ||:.....
Zfish   126 VFGRFMCYLVFLIQPVTVYVSVFTLTAIGVDRYYATVHPLKKRI-SVLACTYLLSG-IWILSCGL 188

  Fly   243 MTPIAVFSQLIPTSRPGYCKCREFWPDQGYE-LFYNILLDFLLLVLPLLVLCVAYILITRTLYVG 306
            :.|....:..:.....|:..|.|||..|..| |.|.....|:..||||..||::|:.|:..|   
Zfish   189 VAPAVAHTYHVEFKDEGFTICEEFWMGQEKERLAYAYSTLFITYVLPLSALCISYLCISVKL--- 250

  Fly   307 MAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGST 371
                                            .||::                            
Zfish   251 --------------------------------RNCVV---------------------------- 255

  Fly   372 NMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLV 436
                                            |..|....|     ||:... |::..:::.::|
Zfish   256 --------------------------------PGHRTQSQA-----EAQRAR-KRKTFRLVSLVV 282

  Fly   437 LEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFLQLLAY----SSSCCNPITYCFMNASFRRA 497
            ..|.|||.|:.|.|    ::..:..:.:|......:|||.:    |||||||..|.:::..||..
Zfish   283 AAFGICWLPISVFN----VLRDIDIDLIDKRYFLLIQLLCHLCGMSSSCCNPFLYAWLHDRFRAE 343

  Fly   498 FVDTFK-------GLPWRRGAGAS 514
            ....|.       |:|....|.||
Zfish   344 LRKMFTCHRRIGIGIPANNCATAS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 100/389 (26%)
TM helix 1 114..138 CDD:320334 8/23 (35%)
TM helix 2 147..169 CDD:320334 11/21 (52%)
TM helix 3 185..207 CDD:320334 9/21 (43%)
TM helix 4 230..246 CDD:320334 3/15 (20%)
TM helix 5 274..297 CDD:320334 9/22 (41%)
TM helix 6 429..451 CDD:320334 7/21 (33%)
TM helix 7 466..491 CDD:320334 11/28 (39%)
prlhr2aNP_001034615.1 7tmA_PrRP_R 59..344 CDD:320516 100/389 (26%)
TM helix 1 60..86 CDD:320516 8/24 (33%)
TM helix 2 93..118 CDD:320516 14/24 (58%)
TM helix 3 132..162 CDD:320516 14/29 (48%)
TM helix 4 173..194 CDD:320516 5/21 (24%)
TM helix 5 220..249 CDD:320516 11/28 (39%)
TM helix 6 269..299 CDD:320516 9/34 (26%)
TM helix 7 312..337 CDD:320516 11/24 (46%)

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